Data from: Considering gene flow when using coalescent methods to delimit lineages of North American pitvipers of the genus Agkistrodon

Burbrink FT, Guiher TJ

Date Published: December 11, 2014

DOI: http://dx.doi.org/10.5061/dryad.v2n38

 

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Title cont11a.phy 2
Downloaded 9 times
Description Nexus file for Agkistrodon contortrix for anonymous locus 11.
Download cont11a.phy 2.nex (51.77 Kb)
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Title cont51a.phy
Downloaded 10 times
Description Nexus file for Agkistrodon contortrix for anonymous locus 51.
Download cont51a.phy.nex (56.99 Kb)
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Title contaa.phy
Downloaded 5 times
Description Nexus file for Agkistrodon contortrix for anonymous locus a.
Download contaa.phy.nex (41.30 Kb)
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Title contcytb.phy
Downloaded 9 times
Description Nexus file for Agkistrodon contortrix for Cytochrome b.
Download contcytb.phy.nex (105.6 Kb)
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Title contnt3a.phy
Downloaded 6 times
Description Nexus file for Agkistrodon contortrix for anonymous locus 3.
Download contnt3a.phy.nex (78.50 Kb)
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Title contsptbn1.phy
Downloaded 6 times
Description Nexus file for Agkistrodon contortrix for sptbn1.
Download contsptbn1.phy.nex (86.53 Kb)
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Title piscanon11.nex 3
Downloaded 4 times
Description Nexus file for Agkistrodon piscivorus for anonymous locus 11.
Download piscanon11.nex 3.nex (54.54 Kb)
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Title pisccytb1.nex 2
Downloaded 5 times
Description Nexus file for Agkistrodon piscivorus for Cytochrome b.
Download pisccytb1.nex 2.nex (134.5 Kb)
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Title piscnt3.nex 3
Downloaded 1 time
Description Nexus file for Agkistrodon piscivorus for NT3.
Download piscnt3.nex 3.nex (110.2 Kb)
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Title piscsptbn1.nex 3
Downloaded 2 times
Description Nexus file for Agkistrodon piscivorus for sptbn1.
Download piscsptbn1.nex 3.nex (141.2 Kb)
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Title piscvim56.nex 4
Downloaded 3 times
Description Nexus file for Agkistrodon piscivorus for Vimentin 5-6.
Download piscvim56.nex 4.nex (116.9 Kb)
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Title piscwl.nex 3
Downloaded 4 times
Description Nexus file for Agkistrodon piscivorus for AHR.
Download piscwl.nex 3.nex (92.31 Kb)
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Title anon 11d outgroups
Downloaded 2 times
Description Nexus file for species tree estimates for anonymous locus 11.
Download anon 11d outgroups.nex (5.001 Kb)
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Title anon 51d outgroups
Downloaded 4 times
Description Nexus file for species tree estimates for anonymous locus 51.
Download anon 51d outgroups.nex (5.183 Kb)
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Title anon ad outgroup
Downloaded 1 time
Description Nexus file for species tree estimates for anonymous locus a.
Download anon ad outgroup.nex (3.377 Kb)
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Title cytbd outgroups
Downloaded 3 times
Description Nexus file for species tree estimates for Cytochrome b.
Download cytbd outgroups.nex (16.23 Kb)
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Title nav56d outgroups
Downloaded 3 times
Description Nexus file for species tree estimates for Nav5-6.
Download nav56d outgroups.nex (7.129 Kb)
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Title nt3d outgroups
Downloaded 3 times
Description Nexus file for species tree estimates for NT3.
Download nt3d outgroups.nex (6.807 Kb)
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Title sptbn1d outgroups
Downloaded 3 times
Description Nexus file for species tree estimates for sptbn1.
Download sptbn1d outgroups.nex (13.86 Kb)
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Title vim56d outgroup
Downloaded 2 times
Description Nexus file for species tree estimates for Vim5-6.
Download vim56d outgroup.nex (8.557 Kb)
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Title wld outgroup
Downloaded 2 times
Description Nexus file for species tree for AHR gene.
Download wld outgroup.nex (6.205 Kb)
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Title Agk collection master_Burbrink&Guiher
Downloaded 32 times
Description Spreadsheet of voucher numbers and collecting localities (georeferenced) for tissues of Agkistrodon contortrix and A. piscivorus used in this study. In the Nexus data files only the numbers prior to the "^" match up to the TG numbers in this list. For example TG103^9 is TG 103 in this list. Nuclear genes have been phased so there may be two copies in the Nexus files (second copy labeled b).
Download Agk collection master_Burbrink&Guiher.txt (77.64 Kb)
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When using this data, please cite the original publication:

Burbrink FT, Guiher TJ (2015) Considering gene flow when using coalescent methods to delimit lineages of North American pitvipers of the genus Agkistrodon. Zoological Journal of the Linnean Society 173(2): 505-526. http://dx.doi.org/10.1111/zoj.12211

Additionally, please cite the Dryad data package:

Burbrink FT, Guiher TJ (2014) Data from: Considering gene flow when using coalescent methods to delimit lineages of North American pitvipers of the genus Agkistrodon. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.v2n38
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