Data from: A phylogenetic backbone for Bivalvia: an RNA-seq approach

González VL, Andrade SCS, Bieler R, Collins TM, Dunn CW, Mikkelsen PM, Taylor JD, Giribet G

Date Published: December 18, 2014

DOI: http://dx.doi.org/10.5061/dryad.v31ms

 

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Title Supermatrices [3 files], individual loci alignments [1377 files], and SuperQ input tree files [3 files].
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Description Data files for: Gonzalez V, Andrade S, Bieler R, Collins T, Dunn C, Mikkelsen P, Taylor J, Giribet G. A phylogenetic backbone for Bivalvia: an RNA-seq approach. There are 1383 files in 3 directories: Supermatrices [3 files], individual loci alignments [1377 files], and SuperQ input tree files [3 files]. Directory1 "Supermatrices" contains: - Supermatrices 1, 2 and 3 for OMA (3 files in total). Directory2 "Loci_alignments" contains: - Individual loci alignments used to construct supermatrices (1377 files in total). Directory3 "SuperQ" contains: - Tree sets used for SuperQ analyses for each loci per supermatrix (3 files in total). Files are named as follows: * Supermatrices: Supermatrix[1/2/3].nex * Tree sets used for SuperQ analyses: Supermatrix[1/2/3]_all_loci.trees * Individual loci alignments used to construct supermatrices: "Loci_identifier".aligned Title: Supermatrices [3 files], individual loci alignments [1377 files], and SuperQ input tree files [3 files].
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When using this data, please cite the original publication:

González VL, Andrade SCS, Bieler R, Collins TM, Dunn CW, Mikkelsen PM, Taylor JD, Giribet G (2015) A phylogenetic backbone for Bivalvia: an RNA-seq approach. Proceedings of the Royal Society B 282(1802): 20142332. http://dx.doi.org/10.1098/rspb.2014.2332

Additionally, please cite the Dryad data package:

González VL, Andrade SCS, Bieler R, Collins TM, Dunn CW, Mikkelsen PM, Taylor JD, Giribet G (2014) Data from: A phylogenetic backbone for Bivalvia: an RNA-seq approach. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.v31ms
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