Data from: Hidden founder effects: small-scale spatial genetic structure in recently established populations of the grassland specialist plant Anthyllis vulneraria

Helsen K, Jacquemyn H, Honnay O

Date Published: April 16, 2015

DOI: http://dx.doi.org/10.5061/dryad.vh6pd

 

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Title Sampling locations
Downloaded 13 times
Description This file contains the GPS sampling locations of all geographically measured Anthyllis vulneraria plants (N=730). Coordinates are given in both Lambert72 and in WGS84. Plant ID's correspond to those in the 'GenAlEx input file'.
Download Sampling locations.xls (122.8 Kb)
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Title GenAlEx input file
Downloaded 18 times
Description This file contains the raw microsatellite (SSR) dataset for all sampled Anthyllis vulneraria individuals (N=896) in GenAlEx format. This file can be converted to other formats using the program GenAlEx.
Download GenAlEx input file.xls (250.8 Kb)
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Title Spagedi input files
Downloaded 29 times
Description This file contains all eight input files used for the Spagedi analyses on the georeferenced Anthyllis vulneraria populations. This file contains both microsatellite (SSR) data and geographical location data.
Download Spagedi input files.xls (281.6 Kb)
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Title Programita input files
Downloaded 15 times
Description This file contains all eight input files used for the Programita point-pattern analyses on the georeferenced Anthyllis vulneraria populations. This file contains geographical location data.
Download Programita input files.xls (151.5 Kb)
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Title STRUCTURE input files
Downloaded 11 times
Description This file contains all eight input files used for the STRUCTURE analyses on the georeferenced Anthyllis vulneraria populations. This file contains microsatellite (SSR) data. This file can be converted to other formats using the program GenAlEx.
Download STRUCTURE input files.xls (198.1 Kb)
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Title R script DAPC analysis
Downloaded 60 times
Description This file contains the R script used for the DAPC assignment analyses to assign Anthyllis vulneraria individuals of recent populations to those of sampled old populations using the adegenet R package.
Download R script DAPC analysis.txt (807 bytes)
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Title R DAPC input file (Anthyllis_new)
Downloaded 52 times
Description This file corresponds to the 'Anthyllis_new.GEN' dataset mentioned in the 'R script DAPC analysis' document.
Download R DAPC input file (Anthyllis_new).gen (31.29 Kb)
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Title R DAPC input file (Anthyllis_old)
Downloaded 46 times
Description This file corresponds to the 'Anthyllis_old.GEN' dataset mentioned in the 'R script DAPC analysis' document.
Download R DAPC input file (Anthyllis_old).gen (52.65 Kb)
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When using this data, please cite the original publication:

Helsen K, Jacquemyn H, Honnay O (2015) Hidden founder effects: small-scale spatial genetic structure in recently established populations of the grassland specialist plant Anthyllis vulneraria. Molecular Ecology 24(11): 2715-2728. http://dx.doi.org/10.1111/mec.13207

Additionally, please cite the Dryad data package:

Helsen K, Jacquemyn H, Honnay O (2015) Data from: Hidden founder effects: small-scale spatial genetic structure in recently established populations of the grassland specialist plant Anthyllis vulneraria. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.vh6pd
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