Data from: Stock enhancement or sea ranching? Insights from monitoring the genetic diversity, relatedness and effective size in a seeded great scallop population (Pecten maximus)

Morvezen R, Boudry P, Laroche J, Charrier G

Date Published: April 18, 2016

DOI: http://dx.doi.org/10.5061/dryad.vh942

 

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Title Pecten-Msat-Genotypes
Downloaded 17 times
Description File: Pecten-Msat-Genotype.xls Contain all the data in excel formating, ready to be converted by a software such as CREATE (Coombs et al. 2008) First sheet ("genotype_raw"): raw data (all individuals genotyped at all microsatellite loci) Each line is an individual animal.Each columns after population and individual identifier contain one allele. Both alleles for a given locus are given consecutively (see header row). For details on microatellites primers, PCR protocols and marker statistics please see Morvezen et al. 2013 and Morvezen et al. 2016 Population names are abbreviated in the publication for simplicity. Name equivalences Hatch=Hatchery=H Wild=W Second sheet ("genotypes_cleaned") Same as the first sheet minus indivudals with >50% missing data. This is the dataset used as input for all analyses in the publication.
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Download Pecten-Msat-Genotype.xls (299.0 Kb)
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Title Genotype_clean-GENEPOP
Downloaded 9 times
Description This file contain the same data as the sheet "genotypes_clean" of the associated excel file, but in GENEPOP (Raymont & Rousset 1995) format. This is provided for convenience of use. Below are the equivalence of population names between files. POPULATION ID GENEPOP ID Hatch12 CAu001 Wild12 NAu001 Hatch07 PmE001 Hatch09 PmE166 Wild07 PmN001 Wild09 PmN101
Download Genotype_clean-GENEPOP.txt (38.17 Kb)
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When using this data, please cite the original publication:

Morvezen R, Boudry P, Laroche J, Charrier G (2016) Stock enhancement or sea ranching? Insights from monitoring the genetic diversity, relatedness and effective population size in a seeded great scallop population (Pecten maximus). Heredity 117(3) 142-148. http://dx.doi.org/10.1038/hdy.2016.42

Additionally, please cite the Dryad data package:

Morvezen R, Boudry P, Laroche J, Charrier G (2016) Data from: Stock enhancement or sea ranching? Insights from monitoring the genetic diversity, relatedness and effective size in a seeded great scallop population (Pecten maximus). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.vh942
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