Data from: Biological factors contributing to bark and ambrosia beetle species diversification

Gohli J, Kirkendall LR, Smith SM, Cognato AI, Hulcr J, Jordal BH

Date Published: February 28, 2017

DOI: http://dx.doi.org/10.5061/dryad.vj853

 

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Title R scripts and input files
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Description File contents: 1: Two BEAST input files for phylogenetic reconstructions; 2: input file, settings file and sample prob. file for BAMM analysis; 3: R script for downloading COI sequences from genbank; 4: R script for processing the 305 species tree (data extraction and pruning to genus tree); 5: R script for prepping 602 spp tree for BAMM and analyses of BAMM output files; 6: R scripts for SLOUCH analyses
Download R scripts and input files.rar (12.21 Mb)
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When using this data, please cite the original publication:

Gohli J, Kirkendall LR, Smith SM, Cognato AI, Hulcr J, Jordal BH (2017) Biological factors contributing to bark and ambrosia beetle species diversification. Evolution 71(5): 1258–1272. http://dx.doi.org/10.1111/evo.13219

Additionally, please cite the Dryad data package:

Gohli J, Kirkendall LR, Smith SM, Cognato AI, Hulcr J, Jordal BH (2017) Data from: Biological factors contributing to bark and ambrosia beetle species diversification. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.vj853
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