Data from: Genome reduction uncovers a large dispensable genome and adaptive role for copy number variation in asexually propagated Solanum tuberosum

Hardigan MA, Crisovan E, Hamilton JP, Kim J, Laimbeer P, Leisner CP, Manrique-Carpintero NC, Newton L, Pham GM, Vaillancourt B, Yang X, Zeng Z, Douches DS, Jiang J, Veilleux RE, Buell CR

Date Published: January 20, 2016

DOI: http://dx.doi.org/10.5061/dryad.vm142

 

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Title less_than_85cov_85id_at_least_500_bp_removed_contamination_transcripts
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Title M1_type_a_snps.hiconf
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Title M4_type_a_snps.hiconf
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Title M5_type_a_snps.hiconf
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Title M6_type_a_snps.hiconf
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Title M7_type_a_snps.hiconf
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Title M8_type_a_snps.hiconf
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Title M9_type_a_snps.hiconf
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Title M10_type_a_snps.hiconf
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Title M11_type_a_snps.hiconf
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Title M13_type_a_snps.hiconf
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Title DM_v4.04_assembly
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Description Contains 2 files: potato_dm_v404_all_pm_un.fasta and potato_dm_ChrUn.gff3
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When using this data, please cite the original publication:

Hardigan MA, Crisovan E, Hamilton JP, Kim J, Laimbeer P, Leisner CP, Manrique-Carpintero NC, Newton L, Pham GM, Vaillancourt B, Yang X, Zeng Z, Douches DS, Jiang J, Veilleux RE, Buell CR (2016) Genome reduction uncovers a large dispensable genome and adaptive role for copy number variation in asexually propagated Solanum tuberosum. The Plant Cell 28(2): 388-405. http://dx.doi.org/10.1105/tpc.15.00538

Additionally, please cite the Dryad data package:

Hardigan MA, Crisovan E, Hamilton JP, Kim J, Laimbeer P, Leisner CP, Manrique-Carpintero NC, Newton L, Pham GM, Vaillancourt B, Yang X, Zeng Z, Douches DS, Jiang J, Veilleux RE, Buell CR (2016) Data from: Genome reduction uncovers a large dispensable genome and adaptive role for copy number variation in asexually propagated Solanum tuberosum. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.vm142
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