Data from: Genetic and morphometric evidence for the recognition of several recently synonymized species of trans-Andean Rhamdia (Pisces: Siluriformes: Heptapteridae)

Hernández CL, Ortega-Lara A, Sánchez-Gárces GC, Alford MH

Date Published: September 4, 2015

DOI: http://dx.doi.org/10.5061/dryad.vq74k

 

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Title Rhamdia Parsimony Matrix
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Description WinClada (.winc) file of 117 Rhamdia individuals for parsimony analysis
Download RhamdiaCOLMay117MP.winc (95.05 Kb)
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Title Rhamdia Parsimony or Maximum Likelihood Nexus File
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Description A nexus (.nxs, .nex) file for use in parsimony and maximum likelihood analyses
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Title Rhamdia Nexus File with Bayesian Analysis Block
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Description Nexus (.nxs, .nex) file for Bayesian analysis using MrBayes. Bayesian block included.
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Title Rhamdia raw morphometrics data
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Description Rhamdia raw morphometrics data in Excel (.xlsx) format
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Title Appendix 1. Parsimony analysis of Rhamdia mt cytb data
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Description Parsimony analysis of Rhamdia mitochondrial cyt b data. Strict consensus with bootstrap support values.
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Title Appendix 2. Most likely tree from ML analysis of Rhamdia mt cytb data
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Description Maximum likelihood analysis of Rhamdia mitochondrial cyt b data. Most likely tree (highest –ln score) of four replications with bootstrap support values. Three of the four replicates resulted in the same topology, best tree with –ln likelihood = –9147.8963.
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Title Appendix 3. Divergence times estimates of Rhamdia species.
Downloaded 22 times
Description Divergence time estimates chronogram from BEAST for several Rhamdia species. Values on branches represent posterior probabilities. Bars correspond to 95% HPD intervals. Stars show calibration points.
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When using this data, please cite the original publication:

Hernández CL, Ortega-Lara A, Sánchez-Gárces GC, Alford MH (2015) Genetic and morphometric evidence for the recognition of several recently synonymized species of trans-Andean Rhamdia (Pisces: Siluriformes: Heptapteridae). Copeia 103(3): 563-579. http://dx.doi.org/10.1643/CI-14-145

Additionally, please cite the Dryad data package:

Hernández CL, Ortega-Lara A, Sánchez-Gárces GC, Alford MH (2015) Data from: Genetic and morphometric evidence for the recognition of several recently synonymized species of trans-Andean Rhamdia (Pisces: Siluriformes: Heptapteridae). Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.vq74k
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