{"_links":{"self":{"href":"/api/v2/search"},"first":{"href":"/api/v2/search"},"last":{"href":"/api/v2/search?page=3632"},"next":{"href":"/api/v2/search?page=2"}},"count":20,"total":72626,"_embedded":{"stash:datasets":[{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.zs7h44jnj"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.zs7h44jnj/versions"},"stash:version":{"href":"/api/v2/versions/467064"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.zs7h44jnj/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.zs7h44jnj","id":164172,"storageSize":7528000,"relatedPublicationISSN":"2639-4979","title":"Shape memory collagen scaffolds sustain large-scale cyclic loading","authors":[{"firstName":"Kyle","lastName":"Vining","email":"viningk@upenn.edu","affiliation":"University of Pennsylvania","affiliationROR":"https://ror.org/00b30xv10","affiliations":[{"organization":"University of Pennsylvania","identifier":"https://ror.org/00b30xv10"}],"orcid":"0000-0002-4009-879X"},{"firstName":"Yan","lastName":"Luo","affiliation":"University of Pennsylvania","affiliationROR":"https://ror.org/00b30xv10","affiliations":[{"organization":"University of Pennsylvania","identifier":"https://ror.org/00b30xv10"}],"orcid":"0009-0009-2505-8990","order":1},{"firstName":"Hardik","lastName":"Makkar","affiliation":"University of Pennsylvania","affiliationROR":"https://ror.org/00b30xv10","affiliations":[{"organization":"University of Pennsylvania","identifier":"https://ror.org/00b30xv10"}],"orcid":"0000-0002-8416-4138","order":2}],"abstract":"\u003cp\u003eNatural biopolymer hydrogels often suffer from relatively low moduli and an inability to maintain structure and mechanics under cyclic loading, limiting their utility in dynamic mechanical environments. Here, a crosslinked collagen cryogel scaffold was fabricated by mechanical pre-compression to densify the network. Following lyophilization, the porous scaffolds maintained sustained \u0026gt;90% axial compressive strain with 200 cycles. Ogden hyperelastic modeling and second harmonic generation (SHG) imaging revealed that fiber alignment, densification, and strain-stiffening contributed to resilience under repetitive large-scale loading. After rehydration, crosslinked and densified hydrogels showed network stability and recoverability under cyclic loading, with a significantly reduced phase transition strain compared to non-crosslinked controls. The scaffolds supported cell encapsulation and maintained cell viability after 50 cycles of 90% compressive strain. Cyclic loading significantly densified the encapsulated cells in the loading direction, comparable to non-loaded controls. Overall, these results suggest that densified, shape memory collagen scaffolds provide a mechanically robust and biocompatible system for dynamic mechanical environments.\u003c/p\u003e","funders":[{"organization":"National Institute of Dental and Craniofacial Research","identifierType":"ror","identifier":"https://ror.org/004a2wv92","awardNumber":"5R90DE031532-05","awardURI":"https://reporter.nih.gov/project-details/11128353","awardDescription":"","awardTitle":"Advanced Training at the Interface of Engineering and Oral-Craniofacial Sciences","order":0},{"organization":"National Heart, Lung, and Blood Institute","identifierType":"ror","identifier":"https://ror.org/012pb6c26","awardNumber":"5R01HL148227-04","awardURI":"https://reporter.nih.gov/project-details/10617840","awardDescription":"","awardTitle":"Mechanisms of mechano-chemical rupture of blood clots and thrombi","order":1},{"organization":"Division of Materials 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and code from: Convergence of sweet and umami in the mammalian taste bud","authors":[{"firstName":"Syed","lastName":"Uddin","email":"","affiliation":"Northwestern University","affiliationROR":"https://ror.org/000e0be47","affiliations":[{"organization":"Northwestern University","identifier":"https://ror.org/000e0be47"}],"orcid":"0000-0002-1537-1512","order":0,"roles":[{"role":"Conceptualization","identifier":"https://credit.niso.org/contributor-roles/conceptualization"},{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Data curation","identifier":"https://credit.niso.org/contributor-roles/data-curation"},{"role":"Writing – original draft","identifier":"https://credit.niso.org/contributor-roles/writing-original-draft"},{"role":"Writing – review \u0026 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University","identifier":"https://ror.org/000e0be47"}],"order":2,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Yue","lastName":"Yu","email":"yuyuenick@gmail.com","affiliation":"Northwestern University","affiliationROR":"https://ror.org/000e0be47","affiliations":[{"organization":"Northwestern University","identifier":"https://ror.org/000e0be47"}],"order":3,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Hanna","lastName":"Rodriguez","email":"hanna.rodriguez@northwestern.edu","affiliation":"Northwestern University","affiliationROR":"https://ror.org/000e0be47","affiliations":[{"organization":"Northwestern University","identifier":"https://ror.org/000e0be47"}],"order":4,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Pouya","lastName":"","email":"","affiliation":"Northwestern University","affiliationROR":"https://ror.org/000e0be47","affiliations":[{"organization":"Northwestern University","identifier":"https://ror.org/000e0be47"}],"order":5,"roles":[{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Hojoon","lastName":"Lee","email":"hojoon.lee@northwestern.edu","affiliation":"Northwestern University","affiliationROR":"https://ror.org/000e0be47","affiliations":[{"organization":"Northwestern University","identifier":"https://ror.org/000e0be47"}],"orcid":"0000-0001-6214-629X","order":6,"roles":[{"role":"Conceptualization","identifier":"https://credit.niso.org/contributor-roles/conceptualization"},{"role":"Data 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We used in vivo two-photon calcium imaging to record GCaMP6f responses from taste receptor cells and from the fiber terminals innervating them in fungiform buds of anesthetized mice. Using this system, we tested how concentration is encoded in taste cells. The concentration-response files cover acesulfame K (sweet), monopotassium glutamate with inosine monophosphate (umami), sodium chloride (salty), cycloheximide (bitter), quinine (bitter), and citric acid (sour). Each value is a cell's peak response at that concentration, normalized to the same cell's response at the highest concentration tested. From these curves, we picked concentrations that evoke EC50-level and maximal responses and built a panel of seven stimuli spanning the five taste qualities, which we then used to record taste cells and taste fibers activity in separate mice. The taste panel files contain those recordings as ΔF/F traces from 83 taste receptor cells and 85 fiber units. Trials lasted 275 seconds; each tastant was delivered for five seconds and followed by a water rinse. All traces were resampled onto a common time base and are labeled with the stimulus being delivered. In the in situ hybridization files, each row is one segmented cell, and the values give the percentage of that cell covered by probe signal, which we used as a proxy for expression level. The mouse data cover Tas1r1, Tas1r2, and Tas1r3 in circumvallate, foliate, and fungiform papillae, and the human data cover TAS1R1 and TAS1R2 in post-mortem tongue. Behavioral files contain bottle weights, consumption, and preference scores from two-bottle conditioned taste aversion tests. We have also included the Python and R scripts used for processing and plotting, along with STL files for the 3D-printed plates that hold and perfuse the tongue during imaging, which can be printed directly. Single-cell RNA sequencing data are available separately through NCBI GEO.\u003c/p\u003e\n","funders":[{"organization":"National Institute on Deafness and Other Communication Disorders","identifierType":"ror","identifier":"https://ror.org/04mhx6838","awardNumber":"1R01DC022740-01A1","awardURI":"https://reporter.nih.gov/project-details/11293994","awardDescription":"","awardTitle":"Structural and Functional Organization of the Peripheral Taste System","order":0},{"organization":"National Institute on Deafness and Other Communication Disorders","identifierType":"ror","identifier":"https://ror.org/04mhx6838","awardNumber":"1R21DC022726-01A1","awardURI":"https://reporter.nih.gov/project-details/11303841","awardDescription":"","awardTitle":"Neural Mechanisms underlying Obesity-induced Taste Dysfunction","order":1},{"organization":"National Center for Complementary and Integrative Health","identifierType":"ror","identifier":"https://ror.org/00190t495","awardNumber":"1R01AT013056-01A1","awardURI":"https://reporter.nih.gov/project-details/11226151","awardDescription":"","awardTitle":"Neural Circuitry of Motioninduced Nausea","order":2},{"organization":"National Institute of Biomedical Imaging and Bioengineering","identifierType":"ror","identifier":"https://ror.org/00372qc85","awardNumber":"1R21EB036732-01","awardURI":"https://reporter.nih.gov/project-details/11037438","awardDescription":"","awardTitle":"Developing a sensor to monitor brain-to-gut communication","order":3},{"organization":"Whitehall Foundation","identifierType":"ror","identifier":"https://ror.org/00her7k05","awardNumber":"","awardDescription":"","awardTitle":"","order":4}],"keywords":["Taste","Taste buds","In vivo imaging"],"fieldOfScience":"Biological sciences","versionNumber":6,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-02","lastModificationDate":"2026-10-02","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.v41ns1sc9","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.h1893201p"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.h1893201p/versions"},"stash:version":{"href":"/api/v2/versions/467009"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.h1893201p/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.h1893201p","id":176198,"storageSize":25106784,"relatedPublicationISSN":"1095-9203","title":"Data and code from: RAF isoform selectivity of MEK inhibitors and rational design of a covalent ARAF-MEK inhibitor","authors":[{"firstName":"Michael","lastName":"Eck","email":"michael_eck@dfci.harvard.edu","affiliation":"Dana-Farber Cancer Institute","affiliationROR":"https://ror.org/02jzgtq86","affiliations":[{"organization":"Dana-Farber Cancer Institute","identifier":"https://ror.org/02jzgtq86"}],"orcid":"0000-0003-4247-9403","order":0},{"firstName":"Sayan","lastName":"Chakraborty","email":"schakr10@crystal.harvard.edu","affiliation":"Dana-Farber Cancer Institute","affiliationROR":"https://ror.org/02jzgtq86","affiliations":[{"organization":"Dana-Farber Cancer Institute","identifier":"https://ror.org/02jzgtq86"}],"orcid":"0000-0002-2580-5097","order":1},{"firstName":"Jie","lastName":"Jiang","email":"jie_jiang@dfci.harvard.edu","affiliation":"Dana-Farber Cancer Institute","affiliationROR":"https://ror.org/02jzgtq86","affiliations":[{"organization":"Dana-Farber Cancer Institute","identifier":"https://ror.org/02jzgtq86"}],"orcid":"0000-0003-3795-672X","order":2},{"firstName":"David","lastName":"Scott","email":"DavidA_Scott@dfci.harvard.edu","affiliation":"Dana-Farber Cancer Institute","affiliationROR":"https://ror.org/02jzgtq86","affiliations":[{"organization":"Dana-Farber Cancer Institute","identifier":"https://ror.org/02jzgtq86"}],"orcid":"0000-0003-3243-528X","order":3},{"firstName":"Hyesung","lastName":"Jeon","email":"hjeon@crystal.harvard.edu","affiliation":"Dana-Farber Cancer Institute","affiliationROR":"https://ror.org/02jzgtq86","affiliations":[{"organization":"Dana-Farber Cancer Institute","identifier":"https://ror.org/02jzgtq86"}],"order":4},{"firstName":"Pasi","lastName":"Jänne","email":"Pasi_Janne@dfci.harvard.edu","affiliation":"Dana-Farber Cancer Institute","affiliationROR":"https://ror.org/02jzgtq86","affiliations":[{"organization":"Dana-Farber Cancer Institute","identifier":"https://ror.org/02jzgtq86"}],"orcid":"0000-0002-7821-4928","order":5}],"abstract":"\u003cp\u003eAberrant activation of the RAS/RAF/MEK/ERK pathway is a frequent cause of cancer. Allosteric MEK inhibitors block this pathway by binding RAF-MEK complexes to prevent activation of MEK by RAF. However, how MEK inhibitor potency varies across the three RAF isoforms remains poorly understood. We profiled seven allosteric MEK inhibitors and observed a striking hierarchy of sensitivity: all most potently inhibited CRAF-driven MEK activation while relatively sparing ARAF-driven activation. Point mutations near the inhibitor binding site in ARAF and CRAF markedly altered inhibitor sensitivity. Through rational design we developed TWG-07-148, a more potent ARAF-MEK inhibitor. Our cryo-EM structure shows how this acrylamide-containing analog of MEK inhibitor trametinib covalently targets Cys514, a residue unique to ARAF. Our studies highlight the importance of the activating RAF isoform as a determinant of MEK inhibitor sensitivity and provide proof-of-concept for development of MEK inhibitors that more effectively block ARAF-driven signaling via covalent targeting of Cys514.\u003c/p\u003e\n","funders":[{"organization":"National Cancer Institute","identifierType":"ror","identifier":"https://ror.org/040gcmg81","awardNumber":"5R35CA242461-07","awardURI":"https://reporter.nih.gov/project-details/11173600","awardDescription":"","awardTitle":"Structure, mechanism, and pharmacology of BRAF and its partners in the RAS/RAF/MAP kinase pathway"},{"organization":"National Cancer Institute","identifierType":"ror","identifier":"https://ror.org/040gcmg81","awardNumber":"5P50CA165962-13","awardURI":"https://reporter.nih.gov/project-details/11417209","awardDescription":"","awardTitle":"Project 1: Targeted therapeutics for pediatric low-grade glioma"}],"keywords":["Signal transduction","Protein kinases","Kinase inhibitors"],"fieldOfScience":"Biological sciences","relatedWorks":[{"relationship":"preprint","identifierType":"DOI","identifier":"https://doi.org/10.64898/2025.12.15.693503"}],"versionNumber":6,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-02","lastModificationDate":"2026-10-02","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.h1893201p","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.9cnp5hqwb"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.9cnp5hqwb/versions"},"stash:version":{"href":"/api/v2/versions/467021"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.9cnp5hqwb/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.9cnp5hqwb","id":152122,"storageSize":127082488,"relatedPublicationISSN":"0962-1083","title":"Limited lifetime costs of inbreeding in a large wild passerine population","authors":[{"firstName":"Jennifer","lastName":"Evans","email":"jennifer.evans@anu.edu.au","affiliation":"Australian National University","affiliationROR":"https://ror.org/019wvm592","affiliations":[{"organization":"Australian National University","identifier":"https://ror.org/019wvm592"}],"orcid":"0009-0001-6682-4710"},{"firstName":"Helen","lastName":"Osmond","email":"","affiliation":"Australian National University","affiliationROR":"https://ror.org/019wvm592","affiliations":[{"organization":"Australian National University","identifier":"https://ror.org/019wvm592"}],"order":1},{"firstName":"Alexander","lastName":"Mikheyev","email":"","affiliation":"Australian National University","affiliationROR":"https://ror.org/019wvm592","affiliations":[{"organization":"Australian National University","identifier":"https://ror.org/019wvm592"}],"order":2},{"firstName":"Loeske","lastName":"Kruuk","email":"","affiliation":"University of Edinburgh","affiliationROR":"https://ror.org/01nrxwf90","affiliations":[{"organization":"University of Edinburgh","identifier":"https://ror.org/01nrxwf90"}],"order":3},{"firstName":"Andrew","lastName":"Cockburn","email":"","affiliation":"Australian National University","affiliationROR":"https://ror.org/019wvm592","affiliations":[{"organization":"Australian National University","identifier":"https://ror.org/019wvm592"}],"order":4}],"abstract":"\u003cp\u003eInbreeding depression can have major negative effects on both individual fitness and population performance. Genomic data offer methods to estimate realised inbreeding in wild populations, which have classically been limited to studies of insular populations without the natural context of dispersal. Here, we apply genomic methods to a superb fairy-wren (\u003cem\u003eMalurus cyaneus\u003c/em\u003e) population that has been subject to detailed study of fitness variation over three decades. We use genomic inbreeding estimates to explicitly test for inbreeding depression across several key components of individual fitness, including nestling condition, juvenile survival, and adult traits. The code repository and datasets provided provide the basis for: 1) Application of genotype calling thresholds to DArTseq data, 2) Modelling of inbreeding depression and 3) Analysis of immigrant genetic contributions. Data presented is de-identified and subset to relevant individuals (1 \u0026amp; 2). The genetic contribution analyses (3) are presented with a mock pedigree.\u003c/p\u003e\n","funders":[{"organization":"Australian Research Council","identifierType":"ror","identifier":"https://ror.org/05mmh0f86","awardNumber":"","awardDescription":"","order":0}],"keywords":["Inbreeding","Malurus","lifetime fitness","Genomics"],"fieldOfScience":"Biological sciences","versionNumber":6,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-02","lastModificationDate":"2026-10-02","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.9cnp5hqwb","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.8931zcs5q"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.8931zcs5q/versions"},"stash:version":{"href":"/api/v2/versions/467022"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.8931zcs5q/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.8931zcs5q","id":184061,"storageSize":172601,"relatedPublicationISSN":"0030-1299","title":"Data and code from: Increasing fire severity changes the assembly and coupling between plant taxonomic and functional diversity in a dry conifer forest understory","authors":[{"firstName":"Ian Archer","lastName":"Winick","email":"iaw1@arizona.edu","affiliation":"University of Arizona","affiliationROR":"https://ror.org/03m2x1q45","affiliations":[{"organization":"University of Arizona","identifier":"https://ror.org/03m2x1q45"}],"orcid":"0009-0000-0836-4528"},{"firstName":"Rachel","lastName":"Mitchell","email":"","affiliation":"University of Arizona","affiliationROR":"https://ror.org/03m2x1q45","affiliations":[{"organization":"University of Arizona","identifier":"https://ror.org/03m2x1q45"}],"order":1}],"abstract":"\u003cp\u003eWe collected community composition data in 60 plots across a burn severity gradient (unburned, low severity, high severity) for five years after a mixed severity fire. We also assembled a trait table for our observed species and included three traits: specific leaf area (SLA), leaf dry matter content (LDMC), and height. R scripts included in this repository are used to analyze the effect of fire severity on beta diversity, functional redundancy, and community composition.\u003c/p\u003e\n","funders":[{"organization":"Division of Environmental Biology","identifierType":"ror","identifier":"https://ror.org/03g87he71","awardNumber":"2230356","awardDescription":"","awardTitle":"Quantifying Plant Mediation of Ecosystem Multifunction in Response to Fire and Warming","order":0}],"keywords":["Community ecology","Disturbance ecology","functional diversity ","Ecology"],"fieldOfScience":"Natural sciences","versionNumber":4,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-02","lastModificationDate":"2026-10-02","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.8931zcs5q","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.f1vhhmhcb"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.f1vhhmhcb/versions"},"stash:version":{"href":"/api/v2/versions/466895"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.f1vhhmhcb/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.f1vhhmhcb","id":193805,"storageSize":2078220,"relatedPublicationISSN":"2813-6780","title":"DBT Fecal DNA Metabarcoding data","authors":[{"firstName":"Mark","lastName":"Merchant","email":"mmerchant@mcneese.edu","affiliation":"McNeese State University","affiliations":[{"organization":"McNeese State University"},{"organization":"McNeese State University","identifier":"https://ror.org/00h04da97"}],"orcid":"0000-0001-6444-4012","roles":[{"role":"Data curation","identifier":"https://credit.niso.org/contributor-roles/data-curation"}]}],"abstract":"\u003cp\u003eThese reads were collected during Fecal DNA Metabarcoding of samples collected from diamondback terrapin (DBT). The data set contains PCR reads for amplified DNA collected from diamondback terrapins.\u003c/p\u003e\n","funders":[{"organization":"McNeese State University","identifierType":"ror","identifier":"https://ror.org/00h04da97","awardNumber":"EP0073","awardDescription":"","awardTitle":"","order":0}],"keywords":["Fecal DNA Metabarcoding","Diamondback Terrapin","Foraging"],"fieldOfScience":"Biological sciences","methods":"\u003cp\u003eDNA was isolated from each sample using QIAamp\u003csup\u003e®\u003c/sup\u003e PowerFecal\u003csup\u003e®\u003c/sup\u003e Pro DNA isolation kits (Qiagen, Germantown, MD, USA). The DNA was submitted to Jonah Ventures (Boulder, CO, USA). The DNA was amplified using primers to detect the presence of plant material (trnl, Taberlet 2007) and invertebrates (COI, Leray et al. 2013).\u003c/p\u003e\n\u003cp\u003eLeray, M. \u003cem\u003eet al.\u003c/em\u003e (2013). A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents. \u003cem\u003eFront. Zool.\u003c/em\u003e 10, 34.\u003c/p\u003e\n\u003cp\u003eTaberlet, P. et al. (2012). Towards next-generation biodiversity assessment using DNA metabarcoding. \u003cem\u003eMol. Ecol.\u003c/em\u003e \u003cstrong\u003e21\u003c/strong\u003e, 2045–2050.\u003c/p\u003e\n","versionNumber":4,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-02","lastModificationDate":"2026-10-02","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.f1vhhmhcb","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.4mw6m90sh"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.4mw6m90sh/versions"},"stash:version":{"href":"/api/v2/versions/467053"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.4mw6m90sh/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.4mw6m90sh","id":188612,"storageSize":33862,"relatedPublicationISSN":"0307-6946","title":"Solitary wasp abundance, environmental, and spatial data from a subtropical evergreen forest","authors":[{"firstName":"Mingyi","lastName":"Wang","email":"wangmy62@gmail.com","affiliation":"Institute of Zoology","affiliationROR":"https://ror.org/05skxkv18","affiliations":[{"organization":"Institute of Zoology","identifier":"https://ror.org/05skxkv18"},{"organization":"Hebei University","identifier":"https://ror.org/01p884a79"}],"orcid":"0009-0008-5559-4631","order":0},{"firstName":"Fang","lastName":"Ouyang","email":"ouyangf@ioz.ac.cn","affiliation":"Institute of Zoology","affiliationROR":"https://ror.org/05skxkv18","affiliations":[{"organization":"Institute of Zoology","identifier":"https://ror.org/05skxkv18"}],"order":1},{"firstName":"Michael","lastName":"Staab","email":"","affiliation":"Technische Universität Darmstadt","affiliationROR":"https://ror.org/05n911h24","affiliations":[{"organization":"Technische Universität Darmstadt","identifier":"https://ror.org/05n911h24"}],"order":2},{"firstName":"Chuge","lastName":"Zhang","email":"","affiliation":"Fujian Agriculture and Forestry University","affiliationROR":"https://ror.org/04kx2sy84","affiliations":[{"organization":"Institute of Zoology","identifier":"https://ror.org/05skxkv18"},{"organization":"Fujian Agriculture and Forestry University","identifier":"https://ror.org/04kx2sy84"}],"order":3},{"firstName":"Zufei","lastName":"Shu","email":"","affiliation":"Guangdong Chebaling National Nature Reserve","affiliations":[{"organization":"Guangdong Chebaling National Nature Reserve"}],"order":4},{"firstName":"Yingming","lastName":"Zhang","email":"","affiliation":"Guangdong Chebaling National Nature Reserve","affiliations":[{"organization":"Guangdong Chebaling National Nature Reserve"}],"order":5},{"firstName":"Feng","lastName":"Zhang","email":"zhangfeng@hbu.cn","affiliation":"Hebei University","affiliationROR":"https://ror.org/01p884a79","affiliations":[{"organization":"Hebei University","identifier":"https://ror.org/01p884a79"}],"order":6},{"firstName":"Zhishu","lastName":"Xiao","email":"xiaozs@ioz.ac.cn","affiliation":"University of Chinese Academy of Sciences","affiliationROR":"https://ror.org/05qbk4x57","affiliations":[{"organization":"Institute of Zoology","identifier":"https://ror.org/05skxkv18"},{"organization":"University of Chinese Academy of Sciences","identifier":"https://ror.org/05qbk4x57"}],"order":7}],"abstract":"\u003cp\u003eThis dataset contains data on solitary wasp communities collected using standardized trap nests in a subtropical evergreen forest in the Chebaling National Nature Reserve, Guangdong Province, southern China, in 2018. The dataset consists of four components: (1) a nest-box-by-species matrix based on the number of brood cells of solitary wasps; (2) a nest-box-by-species matrix based on the number of nesting tubes of solitary wasps; (3) environmental data for each nest box, including trap-nest height, elevation, slope, and canopy habitat treatment; and (4) spatial data consisting of 21 Moran’s eigenvector map (MEM) variables for each nest box. The dataset can be used to examine solitary wasp abundance and community composition, habitat associations with open- and closed-canopy conditions, and the relative influence of environmental and spatial factors on solitary wasp communities.\u003c/p\u003e\n","funders":[{"organization":"Beijing Natural Science Foundation","identifierType":"ror","identifier":"","awardNumber":"","awardDescription":"","awardTitle":"","order":0},{"organization":"Beijing Municipal Forestry and Parks Bureau","identifierType":"ror","identifier":"","awardNumber":"","awardDescription":"","awardTitle":"","order":1},{"organization":"National Forestry and Grassland Administration","identifierType":"ror","identifier":"","awardNumber":"","awardDescription":"","awardTitle":"","order":2},{"organization":"Institute of Zoology","identifierType":"ror","identifier":"https://ror.org/05skxkv18","awardNumber":"","awardDescription":"","awardTitle":"","order":3}],"keywords":["Biodiversity","canopy openness","solitary wasps","Species diversity","subtropical forest"],"fieldOfScience":"Biological sciences","methods":"\u003cp\u003eSolitary wasp data were collected in 2018 in the Chebaling National Nature Reserve, Guangdong Province, southern China. Standardized trap nests containing reed tubes were placed under contrasting open- and closed-canopy habitats. Occupied nesting tubes were collected periodically, dissected, and the numbers of nesting tubes and brood cells were recorded for each solitary wasp species. Adult wasps were identified using morphological characteristics supplemented by DNA barcoding of the mitochondrial COI gene. Environmental variables associated with each trap nest included trap-nest height, elevation, slope, and canopy habitat treatment. Spatial variables were generated using Moran’s eigenvector maps (MEMs).\u003c/p\u003e\n","versionNumber":3,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-02","lastModificationDate":"2026-10-02","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.4mw6m90sh","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.5x69p8dmj"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.5x69p8dmj/versions"},"stash:version":{"href":"/api/v2/versions/467029"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.5x69p8dmj/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.5x69p8dmj","id":192001,"storageSize":5450402735,"relatedPublicationISSN":"2328-4277","title":"Spatiotemporal dynamics of growing-season plant-available water in the Continental United States","authors":[{"firstName":"Sagar","lastName":"Gautam","email":"sgautam@lbl.gov","affiliation":"Sandia National Laboratories California","affiliationROR":"https://ror.org/058m7ey48","affiliations":[{"organization":"Sandia National Laboratories California","identifier":"https://ror.org/058m7ey48"}],"orcid":"0000-0002-0828-1631"},{"firstName":"Chang","lastName":"Gyo Jung","email":"cjung@sandia.gov","affiliation":"Sandia National Laboratories California","affiliationROR":"https://ror.org/058m7ey48","affiliations":[{"organization":"Sandia National Laboratories California","identifier":"https://ror.org/058m7ey48"}],"order":1},{"firstName":"Udaya","lastName":"Vitharana","email":"uvithara@agri.pdn.ac.lk","affiliation":"University of Peradeniya","affiliationROR":"https://ror.org/025h79t26","affiliations":[{"organization":"University of Peradeniya","identifier":"https://ror.org/025h79t26"}],"order":2},{"firstName":"Kunal","lastName":"Poorey","email":"kpoorey@sandia.gov","affiliation":"Sandia National Laboratories California","affiliationROR":"https://ror.org/058m7ey48","affiliations":[{"organization":"Sandia National Laboratories California","identifier":"https://ror.org/058m7ey48"}],"order":3},{"firstName":"Umakant","lastName":"Mishra","email":"umishra@sandia.gov","affiliation":"Sandia National Laboratories California","affiliationROR":"https://ror.org/058m7ey48","affiliations":[{"organization":"Sandia National Laboratories California","identifier":"https://ror.org/058m7ey48"}],"order":4}],"abstract":"\u003cp\u003ePlant-available water (PAW) is a primary regulator of plant growth, ecosystem productivity, and drought resilience, yet its spatial heterogeneity and long-term response to hydrothermal changes remain poorly quantified at continental scales. Here, we quantify historical (2005-2015) and projected (2030-2100) changes in growing-season PAW across the continental United States (CONUS) by integrating site-level soil moisture observations with environmental predictors and bias-corrected downscaled Coupled Model Intercomparison Project phase six (CMIP6) climate projections. Root-zone PAW (0-30 cm) was estimated from soil moisture content, field capacity, and wilting point, thereby capturing coupled soil and climatic controls on plant water availability. Ensemble CMIP6 projections under two Shared Socioeconomic Pathways (SSP): SSP2-4.5 and SSP5-8.5 indicate widespread declines in growing-season PAW, driven primarily by increasing temperature and  vapor-pressure deficit that increase atmospheric evaporative demand, outpacing projected precipitation gains, with substantially stronger drying under SSP5-8.5. Compared to baseline conditions, PAW declines across approximately 6.9-19.8 % of the CONUS, with the largest reductions concentrated in the Great Plains, western Corn Belt, and Intermountain West ecoregions. In contrast, 76.2-84.6 % of the region shows no significant change, while 4.0-8.5 % exhibits increases, primarily across northern forested regions. Collectively, these findings identify emerging hotspots of PAW limitation and highlight growing risks to crop production and rangeland resilience, emphasizing the need for region-specific adaptation and water-management strategies under future environmental conditions.\u003c/p\u003e\n","funders":[{"organization":"Sandia National Laboratories California","identifierType":"ror","identifier":"https://ror.org/058m7ey48","awardNumber":"","awardDescription":"","awardTitle":"","order":0}],"keywords":["Hydrology","Soil science","Climate change"],"fieldOfScience":"Earth and related environmental sciences","versionNumber":4,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-02","lastModificationDate":"2026-10-02","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.5x69p8dmj","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.7272%2FQ6125QTD"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.7272%2FQ6125QTD/versions"},"stash:version":{"href":"/api/v2/versions/467065"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.7272%2FQ6125QTD/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.7272/Q6125QTD","id":38179,"storageSize":1293163988,"relatedPublicationISSN":"1932-6203","title":"Data from: Microtubules are necessary for proper Reticulon localization during mitosis","authors":[{"firstName":"Ulises","lastName":"Diaz","email":"Ulises.Diaz@ucsf.edu","affiliation":"University of California, San Francisco","affiliationROR":"https://ror.org/043mz5j54","affiliations":[{"organization":"University of California, San Francisco","identifier":"https://ror.org/043mz5j54"}],"orcid":"0000-0003-4847-5948"}],"abstract":"\u003cp\u003eDuring mitosis, the structure of the Endoplasmic Reticulum (ER) displays a dramatic reorganization and remodeling, however the mechanism driving these changes is poorly understood. Hairpin-containing ER transmembrane proteins that stabilize ER tubules have been identified as possible factors to promote these drastic changes in ER morphology. Recently, the Reticulon and REEP family of ER shaping proteins have been shown to heavily influence ER morphology by driving the formation of ER tubules, which are known for their close proximity with microtubules. Here, we examine the role of microtubules and other cytoskeletal factors in the dynamics of a Drosophila Reticulon, Reticulon-like 1 (Rtnl1),localization to spindle poles during mitosis in the early embryo. At prometaphase, Rtnl1 is enriched to spindle poles just prior to the ER retention motif KDEL, suggesting a possible recruitment roll for Rtln1 in the bulk localization of ER to spindle poles. Using image analysis based methods and precise temporal injections of cytoskeletal inhibitors in the early syncytial Drosophila embryo, we show that microtubules are necessary for proper Rtnl1 localization to spindles during mitosis. Lastly, we show that astral microtubules, not microfilaments, are necessary for proper Rtnl1 localization to spindle poles, and is largely independent of the minus-end directed motor protein Dynein. This work highlights the role of the microtubule cytoskeleton in Rtnl1 localization to spindles during mitosis and sheds light on a pathway towards inheritance of this major organelle.\u003c/p\u003e\n","funders":[{"organization":"NIH Common Fund","identifierType":"ror","identifier":"https://ror.org/001d55x84","awardNumber":"T34-GM008574","awardDescription":"MARC","order":0}],"keywords":["ER","spinning disk confocal","Drosophila"],"fieldOfScience":"Biological sciences","methods":"\u003cp\u003eTo measure the enrichment of ER markers to spindle poles and their depletion from the cytoplasm, we developed a custom MATLAB script to facilitate the collection and analysis of 6000 ROIs from 30 microinjected embryos. We designed our script to implement manual segmentation followed by automated extraction and assembly of data for individual ROIs across a 10-frame series of images. We start by turning Z stacks into max intensity projections (B,C). Max intensity projections are shown to a user 1 at a time for segmentation (D). Using a binary mask, the program turns user defined segmentations into jpegs (E), which can be used to extract additional values for the same ROIs at any future time. As the program generates jpegs, it produces a binary matrix that defines ROI locations (F). Once the user has segmented all frames, the binary matrix is applied to the original series of images and ROI mean and max intensity values, along with ROI [x,y] coordinates, are bulk extracted from each frame (G). ROI values and coordinates are stored in a new matrix (H). Using a custom particle tracking algorithm the program identifies ROIs that correspond to each other across frames (I). Using index values stored in a separate matrix (J) the program assembles ROI values across time in a new Matrix (K). Lastly, the program normalizes for T0 fold change and saves values using a file naming system that feeds directly into a custom complier script used to put together graphs for experimental groups (L). One iteration of the program produces data for one line (M) and one complete graph requires 6 iterations. (N). Data for one experimental group requires 12 iterations (O).\u003c/p\u003e\n","relatedWorks":[{"relationship":"primary_article","identifierType":"DOI","identifier":"https://doi.org/10.1371/journal.pone.0226327"},{"relationship":"supplemental_information","identifierType":"DOI","identifier":"https://doi.org/10.5281/zenodo.23089214"}],"versionNumber":13,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-02","lastModificationDate":"2026-10-02","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.7272/Q6125QTD","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.6djh9w0xc"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.6djh9w0xc/versions"},"stash:version":{"href":"/api/v2/versions/467068"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.6djh9w0xc/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.6djh9w0xc","id":40276,"storageSize":8694526,"relatedPublicationISSN":"0962-1083","title":"Data from: Complex patterns of differentiation and gene flow underly the divergence of aposematic phenotypes in \u003cem\u003eOophaga\u003c/em\u003e poison frogs","authors":[{"firstName":"Andres","lastName":"Posso-Terranova","email":"andres.posso@usask.ca","affiliation":"University of Saskatchewan","affiliationROR":"https://ror.org/010x8gc63","affiliations":[{"organization":"University of Saskatchewan","identifier":"https://ror.org/010x8gc63"}],"orcid":"0000-0002-2647-3397"},{"firstName":"Jose","lastName":"Andres","email":"jaa53@cornell.edu","affiliation":"Cornell University","affiliationROR":"https://ror.org/05bnh6r87","affiliations":[{"organization":"Cornell University","identifier":"https://ror.org/05bnh6r87"}]},{"firstName":"Jana","lastName":"Ebersbach","email":"jana.ebersbach@usask.ca","affiliation":"University of Saskatchewan","affiliationROR":"https://ror.org/010x8gc63","affiliations":[{"organization":"University of Saskatchewan","identifier":"https://ror.org/010x8gc63"}]}],"abstract":"\u003cp\u003eHybridization and introgression can have complex consequences for both species evolution and conservation. Here, we investigated the origin and characteristics of a putative hybrid zone between two South American poison dart frog species, \u003cem\u003eO. anchicayensis\u003c/em\u003e and the critically endangered \u003cem\u003eO. lehmanni\u003c/em\u003e, which are heavily sought after on the illegal pet market. Using a combination of phenotypic (49 traits) and genomic (ddRADseq) data, we found that the putative hybrids are morphologically distinct from their parental species and confirmed genomic signatures of admixture in these populations. Several lines of evidence (hybrid indices, interspecific hybrid heterozygosity, genomic clines, comparisons with simulated hybrids and demographic modelling) support the conclusion that these populations are not comprised of early-generation hybrids and thus, they likely did not arise as a result of illegal translocations associated with wildlife trafficking. Instead, they likely represent an independent lineage which has persisted through isolation and has only relatively recently re-established gene flow with both parental species. Furthermore, we detected signals of differential introgression from parental species into these hybrid populations which suggest relaxed stabilizing selection on these aposematic color morphs, potentially via context-dependent female choice. These populations thus provide a fascinating window into the role of hybridization, isolation and female choice in the diversification of South American poison dart frogs. In addition, our results underline the importance of landscape conservation measures to protect, not only known localities of nominal species, but also the phenotypic and genomic variation harbored by admixed lineages which represent crucial repositories for the impressive diversity in this system.\u003c/p\u003e\n","keywords":["Divergent evolution","Frogs","Speciation"],"fieldOfScience":"Biological sciences","methods":"\u003cp\u003ePhenotypic data collected from high-resolution pictures of \u003cem\u003eOophaga\u003c/em\u003e individuals. Measurements were taken using ImageJ software (\u003ca href=\"https://imagej.nih.gov/ij/).%C2%A0Genomic\"\u003ehttps://imagej.nih.gov/ij/). Genomic\u003c/a\u003e data (SNPs) was collected using ddRAD tags as described in the Methods section of the main manuscript.\u003c/p\u003e\n","relatedWorks":[{"relationship":"primary_article","identifierType":"DOI","identifier":"https://doi.org/10.1111/mec.15360"}],"versionNumber":12,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-02","lastModificationDate":"2026-10-02","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.6djh9w0xc","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.xwdbrv1th"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.xwdbrv1th/versions"},"stash:version":{"href":"/api/v2/versions/466706"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.xwdbrv1th/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.xwdbrv1th","id":181734,"storageSize":81270,"relatedPublicationISSN":"0931-2048","title":"Data from: Bottom-up effects of cruciferous cultivars on caterpillar parasitoid \u003cem\u003eDiadegma insulare\u003c/em\u003e via its host \u003cem\u003ePlutella xylostella\u003c/em\u003e","authors":[{"firstName":"Raimondas","lastName":"Mozūraitis","email":"raimondas.mozuraitis@su.se","affiliation":"Stockholm University","affiliationROR":"https://ror.org/05f0yaq80","affiliations":[{"organization":"Stockholm University","identifier":"https://ror.org/05f0yaq80"},{"organization":"State Scientific Research Institute Nature Research Centre"}],"orcid":"0000-0002-1719-2294"},{"firstName":"Muhammad Sajid","lastName":"Qureshi","email":"msajid78@hotmail.com","affiliation":"Pir Mehr Ali Shah Arid Agriculture University","affiliationROR":"https://ror.org/035zn2q74","affiliations":[{"organization":"Pir Mehr Ali Shah Arid Agriculture University","identifier":"https://ror.org/035zn2q74"}],"order":1},{"firstName":"Ata","lastName":"ul Mohsin","email":"ataulmohsin@uaar.edu.pk","affiliation":"Pir Mehr Ali Shah Arid Agriculture University","affiliationROR":"https://ror.org/035zn2q74","affiliations":[{"organization":"Pir Mehr Ali Shah Arid Agriculture University","identifier":"https://ror.org/035zn2q74"}],"order":2}],"abstract":"\u003cp\u003eThe diamondback moth, \u003cem\u003ePlutella xylostella\u003c/em\u003e (L.) (Plutellidae: Lepidoptera), is one of the major pests of cruciferous vegetables. To control this notorious pest, the caterpillar parasitoid \u003cem\u003eDiadegma insulare\u003c/em\u003e (Cresson) (Ichneumonidae: Hymenoptera) is the most commonly used as a biocontrol agent. Efficient mass‑rearing of \u003cem\u003eD. insulare\u003c/em\u003e is therefore essential to produce high‑quality parasitoids. In the present study, we examined the bottom-up indirect effects of ten cruciferous cultivars, mediated through \u003cem\u003eP. xylostella\u003c/em\u003e, on the parasitism efficiency, developmental performance, and body fitness of \u003cem\u003eD. insulare\u003c/em\u003e. The results revealed that White Marble (cauliflower) and Asha (cabbage), characterized by higher nitrogen and phosphorus levels and lower potassium levels than the other cultivars, had positive effects on the bioecological parameters and fitness of \u003cem\u003eD. insulare\u003c/em\u003e. The durations of the egg-larval, pupal, and preadult stages of \u003cem\u003eD. insulare\u003c/em\u003e were found to be optimal in association with these cultivars. Moreover, higher adult longevity, increased hind tibia length, and greater adult body weight of the parasitoid were also observed in relation to these two cultivars. These findings suggest that cruciferous cultivars with higher nitrogen and phosphorus and lower potassium content exert favorable effects on \u003cem\u003eD. insulare\u003c/em\u003e through \u003cem\u003eP. xylostella\u003c/em\u003e, and such cultivars may be strategically used to enhance parasitoid activity in the field, to optimise mass-rearing in the laboratory, and to support biological control programs in organic farming.\u003c/p\u003e\n","funders":[{"organization":"Higher Education Commission","identifierType":"ror","identifier":"https://ror.org/038y3sz68","awardNumber":"112-22064-2AV1-016","awardDescription":"","awardTitle":"for the studies under the Indigenous PhD Fellowships ","order":0},{"organization":"the Lithuanian state grant through the State Scientific Research Institute Nature Research Centre","identifierType":"ror","identifier":"","awardNumber":"program 2 Climate and Eco-systems","awardDescription":"","awardTitle":"","order":1}],"keywords":["Biological control","tritrophic associations","Hymenoptera","pest management"],"fieldOfScience":"Biological sciences","methods":"\u003cp\u003eThe experimental studies were carried out in the biocontrol laboratory of the Entomology Department, Pir Mehr Ali Shah - Arid Agriculture University, Rawalpindi, and in the farmers' fields of Taxila (Punjab, Pakistan).\u003c/p\u003e\n\u003ch4\u003e\n\u003ca href=\"#maintenance-of-cultures\" aria-hidden=\"true\" class=\"anchor\" id=\"maintenance-of-cultures\"\u003e\u003c/a\u003eMaintenance of cultures\u003c/h4\u003e\n\u003cp\u003e\u003cstrong\u003ePlant culture of cabbage and cauliflower cultivars\u003c/strong\u003e\u003c/p\u003e\n\u003cp\u003eFive cultivars of cauliflower (\u003cem\u003eBrassica oleracea var. botrytis\u003c/em\u003e L.) (i.e., Smilla, White Marble, Cashmere, White Magic, and TSX-C22) and 5 cultivars of cabbage (\u003cem\u003eBrassica oleracea var. capitata\u003c/em\u003e L.) (i.e., Quisor, Stonehead, Baseball, Asha and Delight Ball) were selected and grown from seeds in seedling trays in the glasshouse of the Entomology Department at Pir Mehr Ali Shah - Arid Agriculture University, Rawalpindi. Peltracom® growth media was utilised to grow the plants. After 5 weeks, plants were transplanted into plastic pots with a diameter of 7.5 cm until the hardening stage. At the age of 45-50 days, plants were utilised for \u003cem\u003eP. xylostella\u003c/em\u003e and \u003cem\u003eD. insulare\u003c/em\u003e rearing and further experimental studies (Qureshi et al. 2020).\u003c/p\u003e\n\u003cp\u003e\u003cem\u003e\u003cstrong\u003ePlutella xylostella\u003c/strong\u003e\u003c/em\u003e \u003cstrong\u003eculture\u003c/strong\u003e\u003c/p\u003e\n\u003cp\u003eLarvae and pupae of \u003cem\u003eP. xylostella\u003c/em\u003e were collected from cauliflower/cabbage fields in Taxila (Punjab, Pakistan). The collected larvae were released onto fresh, untreated potted cauliflower/cabbage plants and reared individually in cages under controlled conditions (25°C, 65±5% RH, 16 L:8 D). Plants were replaced (where needed) until the feeding larvae pupated, and then the developed pupae were transferred to glass vials for adult emergence. The field-collected pupae were also placed singly in glass vials with a honey solution (20%) soaked in cotton plugs for emerging adults. To obtain homogeneous moth progeny and acclimatise them to the host plant cultivars as well as to controlled abiotic conditions, separate plant cultivars were placed in separate rearing cages, and mated \u003cem\u003eP. xylostella\u003c/em\u003e were allowed to lay eggs for 6 hours. Emerged larvae were fed on relevant plant cultivars, and developed pupae were collected in marked glass vials having 57mm length and 27.5mm diameter (Qureshi et al. 2020). Emerging moths were used for further rearing and research studies.\u003c/p\u003e\n\u003cp\u003e\u003cstrong\u003eDiadegma insulare culture\u003c/strong\u003e\u003c/p\u003e\n\u003cp\u003eParasitized larvae and pupae of \u003cem\u003eP. xylostella\u003c/em\u003e were collected from cauliflower/cabbage crops in Taxila (Punjab, Pakistan). The collected larvae were brought to the insect growth chamber (25°C, 65±5% RH, and 16 L) for 8 days, released on fresh, untreated potted cauliflower/cabbage plants, and placed in rearing cages, whereas the collected pupae were placed singly in glass vials. From this field collection, emerged adults of \u003cem\u003eD. insulare\u003c/em\u003e were identified and released into rearing cages for mating, which were provided with honey solution (20%) soaked cotton swabs in Petri plates. To obtain parasitoid progeny of homogeneous age and acclimatised to the host plant cultivars as well as to controlled abiotic conditions, nine potted plants from each cultivar were placed in separate rearing jars along with ten third-instar larvae of \u003cem\u003eP. xylostella\u003c/em\u003e on each plant. After that, ten pairs of mated \u003cem\u003eD. insulare\u003c/em\u003e were released for parasitisation in each rearing cage for 24 hours. Plants were replaced (where needed) until the pupation of all the larvae, and then the developed parasitised pupae were harvested and kept in marked glass vials for adult emergence (Qureshi et al. 2020). Emerging parasitoids were used for further rearing and research studies.\u003c/p\u003e\n\u003cp\u003e\u003cstrong\u003eExperimental layout\u003c/strong\u003e\u003c/p\u003e\n\u003cp\u003eThirty potted plants of each cabbage and cauliflower cultivar were used, with each plant placed individually in a separate cage. Of these thirty plants per cultivar, twenty were infested with newly moulted third-instar larvae of \u003cem\u003eP. xylostella\u003c/em\u003e at a density of ten larvae per plant. Among the infested plants, ten received one pair of two-day-old mated \u003cem\u003eD. insulare\u003c/em\u003e, which were released for 24 hours, while the remaining ten infested plants received only \u003cem\u003eP. xylostella\u003c/em\u003e and served as the infested control. Insects were observed every 24 hours, and the number of surviving larvae was recorded until pupation. Afterwards, the pupae were harvested and kept in labelled glass vials provided with a honey solution (20%) soaked in cotton plugs for emerging adults. Experimental studies were performed by maintaining the controlled conditions of the rearing chamber at 25°C, 65±5% relative humidity, and a photoperiod of 16 L: 8 D (Sarfraz et al. 2009).\u003c/p\u003e\n\u003cp\u003eAfter adult emergence, parasitism (%) was recorded and corrected using control mortality. Male and female parasitoids were distinguished based on the presence or absence of an ovipositor, and the number of individuals of each sex was counted. In addition, biological data regarding egg-larval duration (days), pupal duration (days), preadult duration (days), male and female adult longevity (days), hind tibia length (mm), and adult parasitoid weight (mg) were observed. For that purpose, the day on which larvae were exposed to the parasitoid was considered the date of oviposition. However, the day on which a larva from a certain cultivar fully developed into a \u003cem\u003eD. insulare\u003c/em\u003e's pupa was considered the date of pupation. Moreover, the adult emergence day for each pupa was recorded, and the longevity of each emerged parasitoid adult was also observed until mortality. Dead parasitoids were allowed to dry for seven days, after which their weights were recorded with an analytical balance (Germany, BL-210S). The hind tibia lengths of the parasitoids were measured with an ocular micrometre attached to a microscope (Labomed SMZ1600, Los Angeles, CA, USA).\u003c/p\u003e\n\u003cp\u003e\u003cstrong\u003eBiochemical analysis\u003c/strong\u003e\u003c/p\u003e\n\u003cp\u003eData and methods of biochemical analyses of all the studied plant cultivars used to calculate correlations between plant nutrients and various parasitoid characteristics are already published (Qureshi et al., 2026).\u003c/p\u003e\n\u003cp\u003e\u003cstrong\u003eStatistical analysis\u003c/strong\u003e\u003c/p\u003e\n\u003cp\u003eParasitism (%) of \u003cem\u003eD. insulare\u003c/em\u003e was determined using the following equation (Sarfraz et al., 2009):\u003c/p\u003e\n\u003cp\u003eParasitism (%) = {(P\u003cem\u003e\u003csub\u003eDi\u003c/sub\u003e\u003c/em\u003e~~ ÷ L\u003csub\u003et\u003c/sub\u003e) × 100} +** M\u003csub\u003eC\u003c/sub\u003e\u003c/p\u003e\n\u003cp\u003eWhere: P\u003cem\u003e\u003csub\u003eDi\u003c/sub\u003e\u003c/em\u003e = Number of emerged parasitoids (\u003cem\u003eD. insulare\u003c/em\u003e); L\u003csub\u003et\u003c/sub\u003e*~~*   = Total larvae exposed;\u003c/p\u003e\n\u003cp\u003eM\u003csub\u003eC\u003c/sub\u003e = Corrected mortality\u003c/p\u003e\n\u003cp\u003eM\u003csub\u003eC\u003c/sub\u003e was obtained using the Schneider-Orelli equation (1947):\u003c/p\u003e\n\u003cp\u003eThe sex ratio was determined using the following equation:\u003c/p\u003e\n\u003cp\u003eA completely randomized design was used, and analysis of variance was performed for the studied parameters. All the parasitism and offspring sex ratio data were subjected to arcsine transformation prior to ANOVA. Means of significant treatments were compared using Tukey's HSD test (α=0.05). Pearson correlation was used to determine the relationships between plant nutrients and various biological parameters of \u003cem\u003eD. insulare\u003c/em\u003e. All the collected data were analysed using Statistix 8.1 software (McGraw-Hill 2008), and graphical representations were created in Microsoft Excel (2010). The effects of ten cruciferous cultivars, mediated through P. xylostella, on the parasitism efficiency, developmental performance, and body fitness of D. insulare\u003c/p\u003e\n","versionNumber":5,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-01","lastModificationDate":"2026-10-01","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.xwdbrv1th","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.c866t1gmf"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.c866t1gmf/versions"},"stash:version":{"href":"/api/v2/versions/466709"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.c866t1gmf/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.c866t1gmf","id":170090,"storageSize":32343477,"relatedPublicationISSN":"2375-2548","title":"Chloramine chemistry as a missing link in atmospheric chlorine cycling","authors":[{"firstName":"Yijing","lastName":"Chen","email":"chenyj20@mails.tsinghua.edu.cn","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"orcid":"0009-0003-8094-7586"},{"firstName":"Men","lastName":"Xia","email":"","affiliation":"Nanjing University","affiliationROR":"https://ror.org/01rxvg760","affiliations":[{"organization":"Nanjing University","identifier":"https://ror.org/01rxvg760"}],"order":1},{"firstName":"Jinghui","lastName":"Zhang","email":"","affiliation":"China Telecom (China)","affiliationROR":"https://ror.org/03jgnzt20","affiliations":[{"organization":"China Telecom (China)","identifier":"https://ror.org/03jgnzt20"}],"order":2},{"firstName":"Epameinondas","lastName":"Tsiligiannis","email":"","affiliation":"University of Gothenburg","affiliationROR":"https://ror.org/01tm6cn81","affiliations":[{"organization":"University of Gothenburg","identifier":"https://ror.org/01tm6cn81"}],"order":3},{"firstName":"Cheng","lastName":"Wu","email":"","affiliation":"University of Gothenburg","affiliationROR":"https://ror.org/01tm6cn81","affiliations":[{"organization":"University of Gothenburg","identifier":"https://ror.org/01tm6cn81"}],"order":4},{"firstName":"Chao","lastName":"Yan","email":"","affiliation":"Nanjing University","affiliationROR":"https://ror.org/01rxvg760","affiliations":[{"organization":"Nanjing University","identifier":"https://ror.org/01rxvg760"}],"order":5},{"firstName":"Runlong","lastName":"Cai","email":"","affiliation":"Fudan University","affiliationROR":"https://ror.org/013q1eq08","affiliations":[{"organization":"Fudan University","identifier":"https://ror.org/013q1eq08"}],"order":6},{"firstName":"Guangjie","lastName":"Zheng","email":"","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"order":7},{"firstName":"Yuyang","lastName":"Li","email":"","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"order":8},{"firstName":"Junchen","lastName":"Guo","email":"","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"order":9},{"firstName":"Zhaojin","lastName":"An","email":"","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"order":10},{"firstName":"Yiran","lastName":"Li","email":"","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"order":11},{"firstName":"Xinyan","lastName":"Zhao","email":"","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"order":12},{"firstName":"Qipeng","lastName":"Qu","email":"","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"order":13},{"firstName":"Chenjie","lastName":"Hua","email":"","affiliation":"Beijing University of Chemical Technology","affiliationROR":"https://ror.org/00df5yc52","affiliations":[{"organization":"Beijing University of Chemical Technology","identifier":"https://ror.org/00df5yc52"}],"order":14},{"firstName":"Zongcheng","lastName":"Wang","email":"","affiliation":"Beijing University of Chemical Technology","affiliationROR":"https://ror.org/00df5yc52","affiliations":[{"organization":"Beijing University of Chemical Technology","identifier":"https://ror.org/00df5yc52"}],"order":15},{"firstName":"Shuxiao","lastName":"Wang","email":"","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"order":16},{"firstName":"Yongchun","lastName":"Liu","email":"","affiliation":"Beijing University of Chemical Technology","affiliationROR":"https://ror.org/00df5yc52","affiliations":[{"organization":"Beijing University of Chemical Technology","identifier":"https://ror.org/00df5yc52"}],"order":17},{"firstName":"Lina","lastName":"Cao","email":"","affiliation":"China Telecom (China)","affiliationROR":"https://ror.org/03jgnzt20","affiliations":[{"organization":"China Telecom (China)","identifier":"https://ror.org/03jgnzt20"}],"order":18},{"firstName":"Kebin","lastName":"He","email":"","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"order":19},{"firstName":"Markku","lastName":"Kulmala","email":"","affiliation":"University of Helsinki","affiliationROR":"https://ror.org/040af2s02","affiliations":[{"organization":"University of Helsinki","identifier":"https://ror.org/040af2s02"}],"order":20},{"firstName":"Mattias","lastName":"Hallquist","email":"","affiliation":"University of Gothenburg","affiliationROR":"https://ror.org/01tm6cn81","affiliations":[{"organization":"University of Gothenburg","identifier":"https://ror.org/01tm6cn81"}],"order":21},{"firstName":"Tao","lastName":"Wang","email":"","affiliation":"Hong Kong Polytechnic University","affiliationROR":"https://ror.org/0030zas98","affiliations":[{"organization":"Hong Kong Polytechnic University","identifier":"https://ror.org/0030zas98"}],"order":22},{"firstName":"Douglas","lastName":"Worsnop","email":"","affiliation":"University of Helsinki","affiliationROR":"https://ror.org/040af2s02","affiliations":[{"organization":"University of Helsinki","identifier":"https://ror.org/040af2s02"}],"order":23},{"firstName":"Jingkun","lastName":"Jiang","email":"","affiliation":"Tsinghua University","affiliationROR":"https://ror.org/03cve4549","affiliations":[{"organization":"Tsinghua University","identifier":"https://ror.org/03cve4549"}],"order":24}],"abstract":"\u003cp\u003eChlorine radicals (Cl·) profoundly impact atmospheric oxidation capacity. Chloramines, especially trichloramine (NCl\u003csub\u003e3\u003c/sub\u003e), are emerging precursors of Cl·. However, their sources and roles in the atmosphere remain elusive. This study presents field evidence of primary emissions and explicit secondary production pathways of atmospheric NCl\u003csub\u003e3\u003c/sub\u003e in Beijing, supplemented by observations from New Delhi and reanalysis of measurements in Toronto. We demonstrate that the sequential chlorination reactions initiated by molecular chlorine (Cl\u003csub\u003e2\u003c/sub\u003e) and ammonia (NH\u003csub\u003e3\u003c/sub\u003e) in atmospheric aerosols are a likely source of NCl\u003csub\u003e3\u003c/sub\u003e. The NCl\u003csub\u003e3\u003c/sub\u003e produced in aerosols is a source of gaseous NCl\u003csub\u003e3\u003c/sub\u003e and serves as an intermediate during the conversion from Cl\u003csub\u003e2\u003c/sub\u003e to Cl·, while direct NCl\u003csub\u003e3\u003c/sub\u003e emissions constitute a previously overlooked source of Cl·. Overall, chloramine chemistry alters the Cl· production mechanism and represents a crucial missing pathway to Cl· worldwide.\u003c/p\u003e\n","funders":[{"organization":"National Natural Science Foundation of China","identifierType":"ror","identifier":"https://ror.org/01h0zpd94","awardNumber":"22188102","awardDescription":"","awardTitle":"","order":0},{"organization":"National Natural Science Foundation of China","identifierType":"ror","identifier":"https://ror.org/01h0zpd94","awardNumber":"22327806","awardDescription":"","awardTitle":"","order":1},{"organization":"Swedish Research Council","identifierType":"ror","identifier":"https://ror.org/03zttf063","awardNumber":"2023-045209","awardDescription":"","awardTitle":"","order":2}],"keywords":["Chlorine chemistry","Atmopsheric science","Urban air pollution"],"fieldOfScience":"Earth and related environmental sciences","relatedWorks":[{"relationship":"preprint","identifierType":"DOI","identifier":"https://doi.org/10.21203/rs.3.rs-3931301/v1"},{"relationship":"primary_article","identifierType":"DOI","identifier":"https://doi.org/10.1126/sciadv.adv4298"},{"relationship":"supplemental_information","identifierType":"DOI","identifier":"https://doi.org/10.6084/m9.figshare.30305371"},{"relationship":"software","identifierType":"DOI","identifier":"https://doi.org/10.5281/zenodo.23004594"}],"versionNumber":13,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"metadata_changed","publicationDate":"2026-10-01","lastModificationDate":"2026-10-01","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.c866t1gmf","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":25,"downloads":3,"citations":2}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.dr7sqvb8n"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.dr7sqvb8n/versions"},"stash:version":{"href":"/api/v2/versions/466714"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.dr7sqvb8n/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.dr7sqvb8n","id":154032,"storageSize":6359496,"relatedPublicationISSN":"1095-9203","title":"Data from: Gate-tunable chiral spin mode in WSe2/WS2 moiré superlattices","authors":[{"firstName":"Zhexu","lastName":"Shan","email":"zxshan@zju.edu.cn","affiliation":"Zhejiang University","affiliationROR":"https://ror.org/00a2xv884","affiliations":[{"organization":"Zhejiang University","identifier":"https://ror.org/00a2xv884"}],"order":0},{"firstName":"Wenjian","lastName":"Su","email":"22136014@zju.edu.cn","affiliation":"Zhejiang University","affiliationROR":"https://ror.org/00a2xv884","affiliations":[{"organization":"Zhejiang University","identifier":"https://ror.org/00a2xv884"}],"order":1},{"firstName":"Kenji","lastName":"Watanabe","email":"watanabe.kenji.aml@nims.go.jp","affiliation":"National Institute for Materials Science","affiliationROR":"https://ror.org/026v1ze26","affiliations":[{"organization":"National Institute for Materials Science","identifier":"https://ror.org/026v1ze26"}],"orcid":"0000-0003-3701-8119","order":2},{"firstName":"Takashi","lastName":"Taniguchi","email":"taniguchi.takashi@nims.go.jp","affiliation":"National Institute for Materials Science","affiliationROR":"https://ror.org/026v1ze26","affiliations":[{"organization":"National Institute for Materials Science","identifier":"https://ror.org/026v1ze26"}],"orcid":"0000-0002-1467-3105","order":3},{"firstName":"Shiyao","lastName":"Zhu","email":"syzhu@zju.edu.cn","affiliation":"University of Science and Technology of China Hefei National Research Center for Microscale Physical Sciences","affiliations":[{"organization":"University of Science and Technology of China Hefei National Research Center for Microscale Physical Sciences"}],"order":4},{"firstName":"Yuanfeng","lastName":"Xu","email":"y.xu@zju.edu.cn","affiliation":"Zhejiang University","affiliationROR":"https://ror.org/00a2xv884","affiliations":[{"organization":"Zhejiang University","identifier":"https://ror.org/00a2xv884"}],"orcid":"0000-0002-1390-2308","order":5},{"firstName":"Yanhao","lastName":"Tang","email":"yanhaotc@zju.edu.cn","affiliation":"Zhejiang University","affiliationROR":"https://ror.org/00a2xv884","affiliations":[{"organization":"Zhejiang University","identifier":"https://ror.org/00a2xv884"}],"orcid":"0000-0002-0840-8305","order":6}],"abstract":"\u003cp\u003eThe interplay between many-body and spin-orbit effects (SOC) can lead to novel phenomena in solids. Chiral spin modes (CSM) are collective spin excitations that arise from such interplay and connect states with opposite chirality, which, however, have been rarely observed. Here, we report a gate-tunable CSM that occurs between conduction SOC-split minibands in near-0-twisted WSe2/WS2 heterobilayers. This mode manifests as a sharp resonance with giant Raman efficiency in the pseudovector-symmetry channel of the Raman spectra. By varying the filling, the CSM transitions from a chiral spin exciton to an excitonic polaron. The spin-flip nature is directly confirmed by the Zeeman effect. Moreover, the filling dependence compellingly evidences a charge-transfer insulator at filling of one. Our results demonstrate transition-metal-dichalcogenides moiré superlattices as a fertile platform for exploring exotic low-lying collective excitations.\u003c/p\u003e\n","funders":[{"organization":"Japan Society for the Promotion of Science","identifierType":"ror","identifier":"https://ror.org/00hhkn466","awardNumber":"20H00354","awardDescription":"","awardTitle":""},{"organization":"Japan Society for the Promotion of Science","identifierType":"ror","identifier":"https://ror.org/00hhkn466","awardNumber":"23H02052","awardDescription":"","awardTitle":""},{"organization":"National Natural Science Foundation of China","identifierType":"ror","identifier":"https://ror.org/01h0zpd94","awardNumber":"12274365"},{"organization":"National Natural Science Foundation of China","identifierType":"ror","identifier":"https://ror.org/01h0zpd94","awardNumber":"12374163"},{"organization":"Zhejiang Provincial Natural Science 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Medicine","affiliationROR":"https://ror.org/037zgn354","affiliations":[{"organization":"Johns Hopkins Medicine","identifier":"https://ror.org/037zgn354"}],"orcid":"0000-0002-4323-3264","order":39,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"},{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Supervision","identifier":"https://credit.niso.org/contributor-roles/supervision"},{"role":"Project administration","identifier":"https://credit.niso.org/contributor-roles/project-administration"}]},{"firstName":"Nicholas","lastName":"Theodore","email":"ntheodore@arizona.edu","affiliation":"Johns Hopkins Medicine","affiliationROR":"https://ror.org/037zgn354","affiliations":[{"organization":"Johns Hopkins 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Medicine","affiliationROR":"https://ror.org/037zgn354","affiliations":[{"organization":"Johns Hopkins Medicine","identifier":"https://ror.org/037zgn354"}],"orcid":"0000-0003-0206-5230","order":41,"roles":[{"role":"Conceptualization","identifier":"https://credit.niso.org/contributor-roles/conceptualization"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"},{"role":"Writing – original draft","identifier":"https://credit.niso.org/contributor-roles/writing-original-draft"},{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Data curation","identifier":"https://credit.niso.org/contributor-roles/data-curation"},{"role":"Supervision","identifier":"https://credit.niso.org/contributor-roles/supervision"},{"role":"Project administration","identifier":"https://credit.niso.org/contributor-roles/project-administration"},{"role":"Software","identifier":"https://credit.niso.org/contributor-roles/software"}]}],"abstract":"The days following decompression surgery for acute spinal cord injury (SCI) are a critical period for postoperative monitoring. After wound closure, clinicians lack on-demand access to local spinal cord morphology and hemodynamics, and care therefore remains guided largely by systemic surrogates rather than direct postoperative insight into the injured cord. We present the Multimodal Ultrasound System for Injury Care (MUSIC), a temporary epidural ultrasound neural interface placed during standard decompression surgery to enable postoperative B-mode imaging, Doppler-derived hemodynamic monitoring, and future device-integrated ultrasound actuation. Across simulations, benchtop, human cadaveric, and porcine studies, MUSIC enabled on-demand visualization of cord structure, hematoma tracking, detection and longitudinal tracking of localized Doppler flow signatures attributable to the sulcal artery region, and, in healthy pigs, proof-of-concept focused ultrasound modulation of blood-flow velocity. MUSIC establishes a temporary postoperative acoustic interface that provides spinal cord information to inform monitoring, future management, and localized intervention strategies after SCI. ","funders":[{"organization":"National Institute of General Medical Sciences","identifierType":"ror","identifier":"https://ror.org/04q48ey07","awardNumber":"3T32GM136577-07S2","awardURI":"https://reporter.nih.gov/project-details/11593116","awardDescription":"","awardTitle":"Medical Scientist Training Program","order":9},{"organization":"National Heart, Lung, and Blood Institute","identifierType":"ror","identifier":"https://ror.org/012pb6c26","awardNumber":"5F30HL168823-03","awardURI":"https://reporter.nih.gov/project-details/11293463","awardDescription":"","awardTitle":"Spinal Cord Injury: A Cardiovascular Perspective using Ultrasound","order":10},{"organization":"U.S. National Science Foundation","identifierType":"ror","identifier":"https://ror.org/021nxhr62","awardNumber":"1938939","awardDescription":"Directorate for Technology, Innovation and Partnerships","awardTitle":"STTR","order":3},{"organization":"NSF Office of the 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Technology Development Corporation)","identifierType":"ror","identifier":"","awardNumber":"","awardDescription":"Maryland Innovation Initiative (MII)","awardTitle":"","order":4},{"organization":"National Center for Advancing Translational Sciences","identifierType":"ror","identifier":"https://ror.org/04pw6fb54","awardNumber":"1UM1TR004926-01","awardURI":"https://reporter.nih.gov/project-details/10841225","awardDescription":"Johns Hopkins Institute for Clinical and Translational Research (ICTR)","awardTitle":"Clinical Research Scholar Program (KL2)","order":2},{"organization":"National Institute of Neurological Disorders and Stroke","identifierType":"ror","identifier":"https://ror.org/01s5ya894","awardNumber":"","awardDescription":"NIH Blueprint grant","awardTitle":"","order":1}],"keywords":["Ultrasound imaging","Therapeutic ultrasound","Neurosurgery","Spinal cord injury","Blood flow","Hemodynamics","Medical devices and equipment","Transducers","Biointerfaces","Man-computer interface","Neurotrauma","Trauma medicine","Post-Traumatic","Medical implants","Bioelectronics"],"fieldOfScience":"Engineering and technology","relatedWorks":[{"relationship":"software","identifierType":"DOI","identifier":"https://doi.org/10.5281/zenodo.22907737"},{"relationship":"software","identifierType":"URL","identifier":"https://github.com/HEPIUSLAB/MUSIC_FUS_Analysis"},{"relationship":"software","identifierType":"DOI","identifier":"https://doi.org/10.5281/zenodo.22908234"},{"relationship":"software","identifierType":"URL","identifier":"https://github.com/HEPIUSLAB/HEPIUS_MUSIC_imaging"},{"relationship":"software","identifierType":"DOI","identifier":"https://doi.org/10.5281/zenodo.22908477"},{"relationship":"software","identifierType":"URL","identifier":"https://github.com/HEPIUSLAB/MUSIC_APP"}],"versionNumber":3,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-01","lastModificationDate":"2026-10-01","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.nk98sf891","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.nvx0k6f7r"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.nvx0k6f7r/versions"},"stash:version":{"href":"/api/v2/versions/466806"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.nvx0k6f7r/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.nvx0k6f7r","id":194474,"storageSize":122849,"relatedPublicationISSN":"0012-9658","title":"Data and code from: Migration and colder temperatures constrain microsporidian parasite outbreaks in zooplankton populations","authors":[{"firstName":"Elizabeth","lastName":"Davenport","email":"davenpe@umich.edu","affiliation":"University of Michigan","affiliationROR":"https://ror.org/00jmfr291","affiliations":[{"organization":"Cary Institute of Ecosystem Studies","identifier":"https://ror.org/01dhcyx48"},{"organization":"University of Michigan","identifier":"https://ror.org/00jmfr291"}],"orcid":"0000-0002-2139-6820","roles":[{"role":"Conceptualization","identifier":"https://credit.niso.org/contributor-roles/conceptualization"},{"role":"Data curation","identifier":"https://credit.niso.org/contributor-roles/data-curation"},{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Project administration","identifier":"https://credit.niso.org/contributor-roles/project-administration"},{"role":"Writing – original draft","identifier":"https://credit.niso.org/contributor-roles/writing-original-draft"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"},{"role":"Software","identifier":"https://credit.niso.org/contributor-roles/software"}]},{"firstName":"Marcin","lastName":"Dziuba","email":"marcind@umich.edu","affiliation":"University of Michigan","affiliationROR":"https://ror.org/00jmfr291","affiliations":[{"organization":"University of Michigan","identifier":"https://ror.org/00jmfr291"}],"order":1,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Natalia","lastName":"dos Santos","email":"natferre@umich.edu","affiliation":"University of Michigan","affiliationROR":"https://ror.org/00jmfr291","affiliations":[{"organization":"University of Michigan","identifier":"https://ror.org/00jmfr291"}],"order":2,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Paige","lastName":"McCreadie","email":"paige.mccreadie@colorado.edu","affiliation":"University of Michigan","affiliationROR":"https://ror.org/00jmfr291","affiliations":[{"organization":"University of Michigan","identifier":"https://ror.org/00jmfr291"}],"order":3,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Cristian","lastName":"Huerta","email":"cristiah@umich.edu","affiliation":"University of Michigan","affiliationROR":"https://ror.org/00jmfr291","affiliations":[{"organization":"University of Michigan","identifier":"https://ror.org/00jmfr291"}],"order":4,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Fiona","lastName":"Stanton","email":"fstanton@umich.edu","affiliation":"University of Michigan","affiliationROR":"https://ror.org/00jmfr291","affiliations":[{"organization":"University of Michigan","identifier":"https://ror.org/00jmfr291"}],"order":5,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Kira","lastName":"Monell","email":"kiramonell@gmail.com","affiliation":"University of Michigan","affiliationROR":"https://ror.org/00jmfr291","affiliations":[{"organization":"University of Michigan","identifier":"https://ror.org/00jmfr291"}],"order":6,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Meghan","lastName":"Duffy","email":"","affiliation":"University of Michigan","affiliationROR":"https://ror.org/00jmfr291","affiliations":[{"organization":"University of Michigan","identifier":"https://ror.org/00jmfr291"}],"order":7,"roles":[{"role":"Supervision","identifier":"https://credit.niso.org/contributor-roles/supervision"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]}],"abstract":"\u003cp\u003ePrey frequently encounter multiple natural enemies, so an avoidance behavior in response to one natural enemy, such as diel vertical migration in response to a predator, may alter the conditions, including temperature, in which they encounter another natural enemy, such as a parasite. Many aspects of host-parasite interactions are influenced by temperature (e.g., host susceptibility, transmission, parasite burden, etc.), so daily temperature fluctuations associated with predator-driven diel vertical migration could affect disease dynamics. Furthermore, disease outbreaks often occur seasonally. To test how temperature fluctuations associated with daily vertical migrations and seasonal declines in temperature affected disease outbreaks of the microsporidium \u003cem\u003eOrdospora pajunii\u003c/em\u003e in \u003cem\u003eDaphnia dentifera\u003c/em\u003e populations, we conducted a multi-phase microcosm experiment lasting 84 days with temperatures chosen to reflect ecologically relevant conditions. We subsampled microcosms weekly for host density and infection prevalence. The first phase of the experiment focused on the effect of daily temperature fluctuations versus a constant temperature on infection prevalence. We found that infection prevalence and outbreak size decreased in the temperature fluctuation treatment, suggesting that diel vertical migration in response to high predation risk reduces parasitism. Epidemics also emerged later in the temperature fluctuation treatment. The second experimental phase was motivated by seasonal changes in temperature and tested the effects of declines in temperature on infection prevalence. Our experimental results showed that drops in temperature ended disease outbreaks. For microcosms starting at a constant temperature during the first phase and then experiencing the decline in temperature in the second phase, total host density rebounded as infection prevalence declined; this, plus lower densities in exposed treatments versus their unexposed controls, support a population-level effect of this parasite on host density. Overall, our study experimentally tested the impacts of ecologically relevant temperature treatments related to migration and seasonality on infection prevalence, and our results suggest that temperature is a strong driver of disease for this host-parasite system.\u003c/p\u003e\n","funders":[{"organization":"Division of Biological Infrastructure","identifierType":"ror","identifier":"https://ror.org/04qn9mx93","awardNumber":"2506778","awardDescription":"","awardTitle":"Postdoctoral Fellowship: PRFB: Scaling up the impacts of parasitism: from individual host genotypes to ecosystems","order":0},{"organization":"Gordon and Betty Moore Foundation","identifierType":"ror","identifier":"https://ror.org/006wxqw41","awardNumber":"GBMF9202","awardDescription":"","awardTitle":"","order":1}],"keywords":["Disease ecology","Population ecology","Host-pathogen interactions"],"fieldOfScience":"Biological 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thin-walled silicone ocular implants using parylene-C coated 3D-printed molds","authors":[{"firstName":"Hyeonji","lastName":"Kim","email":"hjkim90@stanford.edu","affiliation":"Stanford University","affiliationROR":"https://ror.org/00f54p054","affiliations":[{"organization":"Stanford University","identifier":"https://ror.org/00f54p054"}],"orcid":"0009-0009-6918-6564","roles":[{"role":"Conceptualization","identifier":"https://credit.niso.org/contributor-roles/conceptualization"},{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Writing – original draft","identifier":"https://credit.niso.org/contributor-roles/writing-original-draft"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Wen","lastName":"Hong","email":"whong95@stanford.edu","affiliation":"Stanford University","affiliationROR":"https://ror.org/00f54p054","affiliations":[{"organization":"Stanford University","identifier":"https://ror.org/00f54p054"}],"order":1,"roles":[{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Sajjad","lastName":"Abdollahramezani","email":"ramezani@stanford.edu","affiliation":"Stanford University","affiliationROR":"https://ror.org/00f54p054","affiliations":[{"organization":"Stanford University","identifier":"https://ror.org/00f54p054"}],"order":2,"roles":[{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"}]},{"firstName":"Daanyal","lastName":"Raja","email":"rajad@stanford.edu","affiliation":"Stanford University","affiliationROR":"https://ror.org/00f54p054","affiliations":[{"organization":"Stanford University","identifier":"https://ror.org/00f54p054"}],"order":3,"roles":[{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Roger","lastName":"Wise","email":"roger.wise@stanford.edu","affiliation":"Stanford University","affiliationROR":"https://ror.org/00f54p054","affiliations":[{"organization":"Stanford University","identifier":"https://ror.org/00f54p054"}],"order":4,"roles":[{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"}]},{"firstName":"Ian","lastName":"Coates","email":"iac19@stanford.edu","affiliation":"Stanford University","affiliationROR":"https://ror.org/00f54p054","affiliations":[{"organization":"Stanford University","identifier":"https://ror.org/00f54p054"}],"order":5,"roles":[{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"},{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"}]},{"firstName":"Joseph M.","lastName":"DeSimone","email":"jmdesimone@stanford.edu","affiliation":"Stanford University","affiliationROR":"https://ror.org/00f54p054","affiliations":[{"organization":"Stanford University","identifier":"https://ror.org/00f54p054"}],"orcid":"0000-0002-1764-8634","order":6,"roles":[{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"}]},{"firstName":"Charles","lastName":"DeBoer","email":"cdeboer@stanford.edu","affiliation":"Stanford University","affiliationROR":"https://ror.org/00f54p054","affiliations":[{"organization":"Stanford University","identifier":"https://ror.org/00f54p054"}],"orcid":"0000-0003-1308-0583","order":7,"roles":[{"role":"Supervision","identifier":"https://credit.niso.org/contributor-roles/supervision"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"},{"role":"Conceptualization","identifier":"https://credit.niso.org/contributor-roles/conceptualization"}]}],"abstract":"\u003cp\u003eSilicone drug delivery implants are widely used, but their fabrication often relies on non‑standardized, empirically tuned protocols that limit reproducibility and transfer across labs. Here, we present a reproducible and generalizable fabrication workflow that brings together design rules, process settings, and validation for rapid fabrication of complex thin-walled biocompatible silicone implants. We outline mold design choices, including vents and micro refill-valve/filter placement, and post‑processing to make smooth inner surfaces, and we compare molds using an applied release agent (mold‑release chemical) versus molds coated with a parylene‑C barrier. Contact angle, Fourier transform infrared spectroscopy (FT-IR), and residue analyses show that parylene‑C prevents cure inhibition and enables clean demolding. We then link spin‑coating variables to membrane thickness and use rheology to guide material selection for pattern fidelity. We also correlate the curing time with network formation and extractable content. Device-level cross-sectional analyses and cytocompatibility assays are also conducted, with the assays indicating excellent compatibility with cells. Taken together, this work provides practical, transferable practice guidance and a reference workflow that other laboratories can adopt to make consistent silicone drug delivery implants and move the field toward standardization.\u003c/p\u003e\n","funders":[{"organization":"Research to Prevent Blindness","identifierType":"ror","identifier":"https://ror.org/04drjs621","awardNumber":"NIH Grant P30-EY026877","awardDescription":"","awardTitle":"","order":0},{"organization":"National Eye Institute","identifierType":"ror","identifier":"https://ror.org/03wkg3b53","awardNumber":"1K08EY036955-01","awardURI":"https://reporter.nih.gov/project-details/11033844","awardDescription":"","awardTitle":"Lens Capsule Based Extended Drug Delivery Device","order":1},{"organization":"Robert Machemer Foundation","identifierType":"ror","identifier":"","awardNumber":"","awardDescription":"","awardTitle":"","order":2},{"organization":"E. Matilda Ziegler Foundation for the Blind","identifierType":"ror","identifier":"https://ror.org/00zj09521","awardNumber":"","awardDescription":"","awardTitle":"","order":3},{"organization":"Alcon Research Institute","identifierType":"ror","identifier":"","awardNumber":"","awardDescription":"","awardTitle":"","order":4}],"keywords":["Drug delivery","device fabrication","Ophthalmic device","3D printing","Micromolding"],"fieldOfScience":"Engineering and technology","relatedWorks":[{"relationship":"primary_article","identifierType":"DOI","identifier":"https://doi.org/10.1007/s44347-026-00063-7"}],"versionNumber":3,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-01","lastModificationDate":"2026-10-01","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.tmpg4f5fz","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.15dv41pcj"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.15dv41pcj/versions"},"stash:version":{"href":"/api/v2/versions/466718"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.15dv41pcj/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.15dv41pcj","id":194309,"storageSize":19106,"relatedPublicationISSN":"0022-0477","title":"Data and code from: Local conspecific density affects the relationship between species abundance and plant-soil feedback in a subtropical forest","authors":[{"firstName":"Dong","lastName":"Dai","email":"daid2018@foxmail.com","affiliation":"East China Normal University","affiliationROR":"https://ror.org/02n96ep67","affiliations":[{"organization":"East China Normal University","identifier":"https://ror.org/02n96ep67"}],"orcid":"0000-0003-2291-3487","order":0,"roles":[{"role":"Conceptualization","identifier":"https://credit.niso.org/contributor-roles/conceptualization"},{"role":"Data curation","identifier":"https://credit.niso.org/contributor-roles/data-curation"},{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Writing – original draft","identifier":"https://credit.niso.org/contributor-roles/writing-original-draft"}]},{"firstName":"Jiarong","lastName":"Yang","affiliation":"East China Normal University","affiliationROR":"https://ror.org/02n96ep67","affiliations":[{"organization":"East China Normal University","identifier":"https://ror.org/02n96ep67"}],"order":1,"roles":[{"role":"Data curation","identifier":"https://credit.niso.org/contributor-roles/data-curation"},{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"}]},{"firstName":"Ganxin","lastName":"Feng","affiliation":"Sun Yat-sen University","affiliationROR":"https://ror.org/0064kty71","affiliations":[{"organization":"Sun Yat-sen University","identifier":"https://ror.org/0064kty71"}],"order":2,"roles":[{"role":"Software","identifier":"https://credit.niso.org/contributor-roles/software"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Minxia","lastName":"Liang","affiliation":"Sun Yat-sen University","affiliationROR":"https://ror.org/0064kty71","affiliations":[{"organization":"Sun Yat-sen University","identifier":"https://ror.org/0064kty71"}],"order":3,"roles":[{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"},{"role":"Writing – original draft","identifier":"https://credit.niso.org/contributor-roles/writing-original-draft"}]},{"firstName":"Yu","lastName":"Liu","email":"","affiliation":"East China Normal University","affiliationROR":"https://ror.org/02n96ep67","affiliations":[{"organization":"East China Normal University","identifier":"https://ror.org/02n96ep67"}],"order":4,"roles":[{"role":"Project administration","identifier":"https://credit.niso.org/contributor-roles/project-administration"},{"role":"Supervision","identifier":"https://credit.niso.org/contributor-roles/supervision"},{"role":"Conceptualization","identifier":"https://credit.niso.org/contributor-roles/conceptualization"}]}],"abstract":"\u003cp\u003eIncreasing evidence suggests that plant-soil feedback (PSF) is essential in shaping species abundance and promoting the coexistence of common and rare species. Yet, empirical studies have yielded inconsistent results regarding the relationship between species abundance and PSF strength. To reconcile the debate on the species abundance–PSF relationship (SAPR), we propose a conceptual framework that decomposes PSF into two components: PSF\u003csub\u003e1\u003c/sub\u003e caused by the focal tree and PSF\u003csub\u003e2\u003c/sub\u003e caused by the nearby conspecific neighbors. These two components drive community assembly and diversity maintenance processes, respectively. Moreover, our framework emphasizes that local species density is critical for measuring species PSF in natural communities. We then conducted a shade-house experiment involving 14 subtropical tree species to test the SAPR in a subtropical forest. We found a significant negative relationship between species abundance and PSF only when inoculum soils were collected from areas with high local conspecific density. The fungal pathogens in the soil and roots were identified as the key driver of this pattern. Our study provides direct experimental evidence that local conspecific density affects the SAPR, which may clarify discrepancies across studies and advance our understanding of how PSF contributes to species coexistence in forest ecosystems. Integrating a conceptual framework with a multi-species soil inoculation PSF experiment, we reveal intensifying negative PSF from rare to common species in a subtropical forest community, with local density influencing this pattern. Consequently, our study suggests that the intricate relationship between species abundance and PSF is closely implicated in the dynamics of local species coexistence. We propose that previous controversies regarding the SAPR primarily stemmed from the neglect of local species density and the confusion of distinct ecological processes across studies.\u003c/p\u003e\n","funders":[{"organization":"National Natural Science Foundation of China","identifierType":"ror","identifier":"https://ror.org/01h0zpd94","awardNumber":"32071645","awardDescription":"","awardTitle":"","order":0},{"organization":"National Natural Science Foundation of China","identifierType":"ror","identifier":"https://ror.org/01h0zpd94","awardNumber":"32471613","awardDescription":"","awardTitle":"","order":1},{"organization":"National Natural Science Foundation of China","identifierType":"ror","identifier":"https://ror.org/01h0zpd94","awardNumber":"32471606","awardDescription":"","awardTitle":"","order":2}],"keywords":["plant-soil feedback","subtropical forest","Community ecology"],"fieldOfScience":"Earth and related environmental sciences","versionNumber":2,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-01","lastModificationDate":"2026-10-01","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.15dv41pcj","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.w9ghx3g61"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.w9ghx3g61/versions"},"stash:version":{"href":"/api/v2/versions/466828"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.w9ghx3g61/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.w9ghx3g61","id":194348,"storageSize":4162954469,"relatedPublicationISSN":"1936-0851","title":"Capturing the hidden short-range order in amorphous oxide interfaces that directs quasi-epitaxial thin-film growth","authors":[{"firstName":"Junghwa","lastName":"Kim","email":"kjunghwa@mit.edu","affiliation":"Massachusetts Institute of Technology","affiliationROR":"https://ror.org/042nb2s44","affiliations":[{"organization":"Massachusetts Institute of Technology","identifier":"https://ror.org/042nb2s44"}],"orcid":"0000-0002-2615-963X","order":0},{"firstName":"SeungGyo","lastName":"Jeong","email":"","affiliation":"Samsung Electronics (South Korea)","affiliationROR":"https://ror.org/020m7t761","affiliations":[{"organization":"Samsung Electronics (South Korea)","identifier":"https://ror.org/020m7t761"}],"order":1},{"firstName":"Whan Kyun","lastName":"Kim","email":"","affiliation":"Samsung Electronics (South Korea)","affiliationROR":"https://ror.org/020m7t761","affiliations":[{"organization":"Samsung Electronics (South Korea)","identifier":"https://ror.org/020m7t761"}],"order":2},{"firstName":"Soo-Yoon","lastName":"Hwang","email":"","affiliation":"Massachusetts Institute of Technology","affiliationROR":"https://ror.org/042nb2s44","affiliations":[{"organization":"Massachusetts Institute of Technology","identifier":"https://ror.org/042nb2s44"}],"order":3},{"firstName":"Kwangrak","lastName":"Kim","email":"","affiliation":"Samsung Electronics (South Korea)","affiliationROR":"https://ror.org/020m7t761","affiliations":[{"organization":"Samsung Electronics (South Korea)","identifier":"https://ror.org/020m7t761"}],"order":4},{"firstName":"Junho","lastName":"Jeong","email":"","affiliation":"Samsung Electronics (South Korea)","affiliationROR":"https://ror.org/020m7t761","affiliations":[{"organization":"Samsung Electronics (South Korea)","identifier":"https://ror.org/020m7t761"}],"order":5},{"firstName":"Hansaem","lastName":"Park","email":"","affiliation":"Samsung Electronics (South Korea)","affiliationROR":"https://ror.org/020m7t761","affiliations":[{"organization":"Samsung Electronics (South Korea)","identifier":"https://ror.org/020m7t761"}],"order":6},{"firstName":"Wookrae","lastName":"Kim","email":"","affiliation":"Samsung Electronics (South Korea)","affiliationROR":"https://ror.org/020m7t761","affiliations":[{"organization":"Samsung Electronics (South Korea)","identifier":"https://ror.org/020m7t761"}],"order":7},{"firstName":"Jeong-Heon","lastName":"Park","email":"","affiliation":"Samsung Electronics (South Korea)","affiliationROR":"https://ror.org/020m7t761","affiliations":[{"organization":"Samsung Electronics (South Korea)","identifier":"https://ror.org/020m7t761"}],"order":8},{"firstName":"Myungjun","lastName":"Lee","email":"","affiliation":"Samsung Electronics (South Korea)","affiliationROR":"https://ror.org/020m7t761","affiliations":[{"organization":"Samsung Electronics (South Korea)","identifier":"https://ror.org/020m7t761"}],"order":9},{"firstName":"Sangjin","lastName":"Hyun","email":"","affiliation":"Samsung Electronics (South Korea)","affiliationROR":"https://ror.org/020m7t761","affiliations":[{"organization":"Samsung Electronics (South Korea)","identifier":"https://ror.org/020m7t761"}],"order":10},{"firstName":"James M.","lastName":"LeBeau","email":"","affiliation":"Massachusetts Institute of Technology","affiliationROR":"https://ror.org/042nb2s44","affiliations":[{"organization":"Massachusetts Institute of Technology","identifier":"https://ror.org/042nb2s44"}],"order":11}],"abstract":"\u003cp\u003eAs solid-state device architectures become increasingly complex, buried interfaces play a critical role in determining thin-film texture, morphology, and defect formation. However, resolving the structural features that control growth on nominally amorphous interlayers remains challenging because it requires three-dimensional sensitivity at high spatial resolution. Here, we combine four-dimensional scanning transmission electron microscopy, fluctuation electron microscopy, and multislice electron ptychography to investigate ruthenium (Ru) thin films grown on an underlying amorphous Ta\u003csub\u003e2\u003c/sub\u003eO\u003csub\u003e5\u003c/sub\u003e layer, a material stack relevant for next-generation electronic and spintronic devices. Although the Ta\u003csub\u003e2\u003c/sub\u003eO\u003csub\u003e5\u003c/sub\u003e layer appears amorphous in conventional imaging, from diffraction and depth-resolved ptychographic reconstructions, nanoscale β-Ta\u003csub\u003e2\u003c/sub\u003eO\u003csub\u003e5\u003c/sub\u003e-like ordered motifs are revealed near the Ru/Ta\u003csub\u003e2\u003c/sub\u003eO\u003csub\u003e5\u003c/sub\u003e interface. These locally ordered motifs, together with the interfacial morphology, guide the orientation of the Ru layer and produce a textured, quasi-epitaxial film. The curved and atomically rough interface further induces depth-dependent strain gradients and promotes planar defect formation within the Ru layer. Collectively, these results demonstrate that hidden short-range order within nominally amorphous oxides can direct the growth of metallic thin films, providing a framework for engineering buried interfaces in advanced electronic and spintronic material stacks.\u003c/p\u003e\n","funders":[{"organization":"Samsung Electronics (South Korea)","identifierType":"ror","identifier":"https://ror.org/020m7t761","awardNumber":"IO250115-11747-01","awardDescription":"","awardTitle":"","order":0}],"keywords":["Semiconductors","multislice electron ptychography","Electron microscopy","Thin films"],"fieldOfScience":"Materials engineering","relatedWorks":[{"relationship":"dataset","identifierType":"DOI","identifier":"https://doi.org/10.5061/dryad.7sqv9s56c"},{"relationship":"dataset","identifierType":"DOI","identifier":"https://doi.org/10.5061/dryad.547d7wmjn"}],"versionNumber":2,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-01","lastModificationDate":"2026-10-01","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.w9ghx3g61","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.3bk3j9m2f"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.3bk3j9m2f/versions"},"stash:version":{"href":"/api/v2/versions/466794"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.3bk3j9m2f/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.3bk3j9m2f","id":193291,"storageSize":70868,"relatedPublicationISSN":"0909-6396","title":"Data from: Unraveling antler progression progression in desert mule deer: implications for common management practices.","authors":[{"firstName":"Justin T.","lastName":"French","email":"","affiliation":"Sul Ross State University","affiliationROR":"https://ror.org/03x7qhw59","affiliations":[{"organization":"Sul Ross State University","identifier":"https://ror.org/03x7qhw59"}],"order":0,"roles":[{"role":"Conceptualization","identifier":"https://credit.niso.org/contributor-roles/conceptualization"},{"role":"Data curation","identifier":"https://credit.niso.org/contributor-roles/data-curation"},{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Methodology","identifier":"https://credit.niso.org/contributor-roles/methodology"},{"role":"Project administration","identifier":"https://credit.niso.org/contributor-roles/project-administration"},{"role":"Writing – original draft","identifier":"https://credit.niso.org/contributor-roles/writing-original-draft"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Mark E.","lastName":"Bell","email":"meb25ea@sulross.edu","affiliation":"Sul Ross State University","affiliationROR":"https://ror.org/03x7qhw59","affiliations":[{"organization":"Sul Ross State University","identifier":"https://ror.org/03x7qhw59"}],"orcid":"0000-0003-0746-3123","order":1,"roles":[{"role":"Project administration","identifier":"https://credit.niso.org/contributor-roles/project-administration"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"},{"role":"Writing – original draft","identifier":"https://credit.niso.org/contributor-roles/writing-original-draft"}]},{"firstName":"Thomas S.","lastName":"Janke","email":"","affiliation":"Sul Ross State University","affiliationROR":"https://ror.org/03x7qhw59","affiliations":[{"organization":"Sul Ross State University","identifier":"https://ror.org/03x7qhw59"}],"order":2,"roles":[{"role":"Data curation","identifier":"https://credit.niso.org/contributor-roles/data-curation"}]},{"firstName":"Juan J.","lastName":"Celaya","email":"","affiliation":"Sul Ross State University","affiliationROR":"https://ror.org/03x7qhw59","affiliations":[{"organization":"Sul Ross State University","identifier":"https://ror.org/03x7qhw59"}],"order":3,"roles":[{"role":"Data curation","identifier":"https://credit.niso.org/contributor-roles/data-curation"}]},{"firstName":"Carlos E.","lastName":"Gonzalez","email":"","affiliation":"Sul Ross State University","affiliationROR":"https://ror.org/03x7qhw59","affiliations":[{"organization":"Sul Ross State University","identifier":"https://ror.org/03x7qhw59"}],"order":4,"roles":[{"role":"Data curation","identifier":"https://credit.niso.org/contributor-roles/data-curation"},{"role":"Supervision","identifier":"https://credit.niso.org/contributor-roles/supervision"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]},{"firstName":"Louis A.","lastName":"","email":"","affiliation":"Sul Ross State University","affiliationROR":"https://ror.org/03x7qhw59","affiliations":[{"organization":"Sul Ross State University","identifier":"https://ror.org/03x7qhw59"}],"order":5,"roles":[{"role":"Investigation","identifier":"https://credit.niso.org/contributor-roles/investigation"},{"role":"Project administration","identifier":"https://credit.niso.org/contributor-roles/project-administration"},{"role":"Writing – review \u0026 editing","identifier":"https://credit.niso.org/contributor-roles/writing-review-editing"}]}],"abstract":"\u003cp\u003eAntler characteristics are widely used in the management of cervids, including as criteria for harvest and selective culling, yet longitudinal data describing how antler characteristics change as individual animals age remain limited for mule deer (\u003cem\u003eOdocoileus hemionus\u003c/em\u003e). This dataset contains repeated antler measurements from 54 known-age male mule deer monitored on the privately owned Apache Ranch near Van Horn, Texas, USA. Individual bucks were identified using uniquely identifiable ear tags and were monitored across multiple age classes, allowing changes in antler size and morphology to be tracked within individuals through time.\u003c/p\u003e\n\u003cp\u003eThe dataset is organized with one row representing the antler measurements of one individual at a particular age. Consequently, individuals monitored for multiple years occur in multiple rows representing successive age classes. Variables include individual identification, age, gross and estimated Boone and Crockett (B\u0026amp;C) scores, numbers of typical and scorable antler points, inside spread, right and left main-beam lengths, individual typical tine measurements (G1–G4), circumference measurements (H1–H4), abnormal point measurements, and antler mass measurements. Linear antler measurements and B\u0026amp;C scores are reported in inches, generally to the nearest 1/8 inch.\u003c/p\u003e\n\u003cp\u003eAntler measurements were obtained from images collected using cameras positioned at supplemental feeders and were made by a certified Boone and Crockett scorer. The study population occurred on private property and had access to supplemental feed throughout the year; these conditions should be considered when comparing antler development with other free-ranging mule deer populations.\u003c/p\u003e\n\u003cp\u003eThe repeated-measures structure of the dataset allows users to evaluate individual antler progression with age, variation among individuals, age-specific antler characteristics, antler asymmetry, development of typical and abnormal points, and relationships among different measures of antler size. The data may also be useful for comparative studies and meta-analyses of antler development, cervid growth, harvest criteria, and age-related changes in antler morphology. Individual identifiers are animal identification codes and do not contain personally identifiable information. Exact locations of individual animals are not provided, and the dataset contains no human-subject data.\u003c/p\u003e\n","keywords":["Antlers","Deer","Principal component analysis"],"fieldOfScience":"Natural sciences","versionNumber":4,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-01","lastModificationDate":"2026-10-01","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.3bk3j9m2f","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}},{"_links":{"self":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.qz612jmx6"},"stash:versions":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.qz612jmx6/versions"},"stash:version":{"href":"/api/v2/versions/466804"},"stash:download":{"href":"/api/v2/datasets/doi%3A10.5061%2Fdryad.qz612jmx6/download"},"curies":[{"name":"stash","href":"https://github.com/datadryad/dryad-app/blob/main/documentation/apis/link_relations.md#{rel}","templated":"true"}]},"identifier":"doi:10.5061/dryad.qz612jmx6","id":184864,"storageSize":319707,"relatedPublicationISSN":"2045-7758","title":"Data from: Habitat use across the geographic range of \u003cem\u003eLimenitis reducta\u003c/em\u003e reveals stronger constraints at the northern edge","authors":[{"firstName":"Julius","lastName":"Kaiser","email":"kaiser.julius01@gmail.com","affiliation":"Rottenburg University of Applied Forest Sciences","affiliationROR":"https://ror.org/02pnhcc10","affiliations":[{"organization":"Rottenburg University of Applied Forest Sciences","identifier":"https://ror.org/02pnhcc10"}],"orcid":"0009-0002-4037-5643"},{"firstName":"Heiko","lastName":"Hinneberg","email":"heiko.hinneberg@web.de","affiliation":"Regierungspräsidium Tübingen","affiliations":[{"organization":"Regierungspräsidium Tübingen"}],"order":1},{"firstName":"Thomas K.","lastName":"Gottschalk","email":"gottschalk@hs-rottenburg.de","affiliation":"Rottenburg University of Applied Forest Sciences","affiliationROR":"https://ror.org/02pnhcc10","affiliations":[{"organization":"Rottenburg University of Applied Forest Sciences","identifier":"https://ror.org/02pnhcc10"}],"order":2}],"abstract":"\u003cp\u003eSpecies abundance typically declines toward the edges of geographic ranges, while their conservation relevance increases. Habitat studies therefore often focus on only small parts of species' ranges, potentially biasing our understanding of ecological niches. Here, we compared habitat use of the Southern White Admiral (\u003cem\u003eLimenitis reducta\u003c/em\u003e) between populations at the northern and near the southern range edge to assess whether and how habitat associations differ across the species' distribution range. The Swabian Jura represents the northern range edge, while the Turkish Aegean region lies near the southern range edge within the Mediterranean core distribution. We systematically surveyed larval stages in both regions. We compared host plant species, host plant height, site exposition, solar radiation duration at host plants, and shading by neighboring trees. In addition, the height of the larvae above ground was recorded. Host plant species differed between regions but belonged to the genus \u003cem\u003eLonicera\u003c/em\u003e in both. The species was associated with relatively well-sunlit sites in both regions, reflected by preferences for host plants receiving high solar radiation and low shading by neighboring trees. These associations were markedly stronger at the northern range edge. Larvae were found higher above ground at the northern range edge, and species occurrence was positively associated with host plant height in both regions. Regional differences in habitat associations indicate differences in realized microhabitat use between regions with contrasting macroclimatic conditions. The stronger association with highly sun-exposed habitats at the northern range edge is consistent with the hypothesis that habitat use is more strongly constrained under cooler climatic conditions than near the southern range edge. These findings highlight the importance of considering multiple parts of a species' geographic range when assessing habitat associations and developing conservation strategies under changing climatic conditions.\u003c/p\u003e\n","keywords":["host plant selection","light availability","Limenitis reducta","microclimate tracking","niche conservatism","northern edge populations"],"fieldOfScience":"Earth and related environmental sciences","relatedWorks":[{"relationship":"primary_article","identifierType":"DOI","identifier":"https://doi.org/10.1002/ece3.74265"}],"versionNumber":6,"versionStatus":"submitted","curationStatus":"Published","versionChanges":"files_changed","publicationDate":"2026-10-01","lastModificationDate":"2026-10-01","visibility":"public","sharingLink":"http://datadryad.org/dataset/doi:10.5061/dryad.qz612jmx6","license":"https://spdx.org/licenses/CC0-1.0.html","metrics":{"views":0,"downloads":0,"citations":0}}]}}