Data from: Skyglow and especially direct streetlight pollution alter moth communities
Data files
Apr 01, 2025 version files 925.97 KB
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EVdS_et_al-EnvPol.zip
922.17 KB
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README.md
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Abstract
Dataset DOI: 10.5061/dryad.6djh9w1d2
Description of the data and file structure
The dataset “EVdS et al-EnvPol.xlsx” contains: moth abundance data from gardens under different skyglow levels and with or without nearby streetlights; environmental data for each garden; moth species traits. Moths were sampled in collaboration with citizen scientists, using both light and bait traps. Light trapping took place on pre-defined nights; moths were photographed by the volunteers ,and moths were identified by the first author using local literature. Bait traps remained continuously active for several days; trapped moths were collected by the authors and identified using local literature and moth genitalia examination. All missing data given as NA.
Files and variables
File: EVdS_et_al-EnvPol.zip
Description: This dataset contains all data used for our analyses in the R-script (“EVdS et al-EnvPol.R”). It contains: moth abundance data per sampling; environmental data for each garden; species trait data.
Sample: Moth abundance data for each individual sampling.
Trap: Pooled abundance data per garden per trap type.
Site: Pooled abundance data per garden.
LedBait: Pooled abundance data per trap type.
Cond: Pooled abundance data per light pollution condition per trap type.
FMSample: Abundance data for each individual sampling; for species trait analysis.
FMSample01: Presence/absence data for each individual sampling; for species trait analysis.
Trait: Species trait data
Variables abundance/presence-absence data:
- Skyglow: skyglow level at sampling site. Low = low-medium; high = high-medium.
- SL: Yes = nearby streetlight present; No = no nearby streetlight.
- SQM: Sky Quality Meter (mag./arc sec²).
- NearestSL: distance between sampling site and nearest streetlight (m).
- Trap: trap type.
- Day: day of the year sampling took place (light trap) or began (bait trap).
- SL400: number of streetlights within 400 m of the sampling site.
- BA400: built-up area within 400 m of the sampling site (%).
- Area: garden area (m²).
- Forest400: forested area within 400 m of the sampling site (m²).
Variables trait data:
- Spec: scientific species name.
- Species: abbreviation species name.
- Family: moth family.
- FWL: mean forewing length (mm).
- FWLmin: minimal forewing length (mm).
- FWLmax: maximal forewing length (mm).
(For the following variables, 1 = yes; 0 = no)
- Monov: monovoltine.
- Biv: bivoltine.
- Multiv: multivoltine.
- Cover: prefered habitat openness.
- Hibern: hibernation stage.
- Larva: larval habitation.
- Monoph: monophagous.
- Oligoph: oligophagous.
- Polyph: polyphagous.
- AdultTwilight: adult active at twilight.
File: EVdS_et_al-EnvPol.R
- Packages: readxl, vegan, car, effects, lme4, lmerTest, BAT, ggplot2, ggthemes, gridExtra, egg, ggeffects, ggbiplot, blmeco, emmeans, ggVennDiagram
- Functions:
- sumSE: function to calculate group means and standard errors. These are also used to produce the graphs.
- Size…: funcions to set figure sizes.
- Statistical tests:
- Environment ~ Treatment: test to verify whether environmental variables differ between light pollution conditions.
- Diversity: test differences in diversity measures between light pollution conditions.
- perManova: perManova to test differences in community composition between light pollution conditions.
- NMDS: visualisation of differences in community composition between light pollution conditions.
- CWM: test differences in community-weighted means of moth species traits between light pollution conditions.
- Figures: contains the script to produce the graphs.