Data from: Integrating soil properties into species distribution models enhances predictive accuracy for terricolous macrofungi
Data files
Mar 31, 2025 version files 123.38 MB
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Fungi_Environmental_Data.zip
123.18 MB
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Predictor_Discription.xlsx
14.94 KB
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Predictor_GLM.csv
48.13 KB
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Predictor_MAXENT.csv
47.60 KB
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Predictor_RF.csv
47.65 KB
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R_Scripts.zip
45.31 KB
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README.md
1.68 KB
Abstract
https://doi.org/10.5061/dryad.9p8cz8wrv
Data
File: Fungi_Environmental_Data.zip
Description: Fungi data were provided by the courtesy of the SwissFungi data and information centre (https://swissfungi.wsl.ch). We provide individual csv files for all 162 fungi species (Fungi_Environmental_Data.zip), which contain presence and absence data as well as the corresponding environmental data. The species names are given in the filename. Please refer to main article and its online supplementary material for description of the data. Geographic coordinates were removed.
The environment variables are described in the file Predictor_Discription.xlsx. The names of the variables used in the three model algorithms (GLM, MAXENT, Random Forest) are given in the files Predictor_GLM.csv, Predictor_MAXENT.csv and Predictor_RF.csv.
Code
File: R_Scripts.zip
The R scripts to reproduce our results are provided. Please read the accompanying ReadME. The order and main function of the scripts are organised as follows:
- Data Cleaning
- Variable Selection
- Model Calibration
- Analyses and Visualizations
Access information
Other publicly accessible locations of the data:
- Soil maps
Soil data was derived from the following sources: