Data from: Local adaptation in parapatric and sympatric mosaic coastal habitats through trait divergence of Setaria viridis
Data files
Dec 20, 2023 version files 115.39 KB
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20142015_SiteA_Monitoring.txt
7.02 KB
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2015_TyphoonEffect.txt
1.29 KB
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2020_Lateflowering_Morphology_SSTI.csv
2.22 KB
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2020_Mophology_SSTI.txt
24.26 KB
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20202021_SiteB_Monitoring.txt
8.22 KB
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20202021_Transplant.txt
2.27 KB
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2021_Lateflowering_Morphology_SSTI.csv
2.22 KB
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2021_Morphology_SSTI.txt
25.86 KB
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Daystoheading_F2Segregation.txt
9.20 KB
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Daystoheading_Lateflowering_Progeny.txt
3.57 KB
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Plantlength_F2Segregation.txt
6.47 KB
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README.md
5.07 KB
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SSTI_F2F3Correlation.txt
8.79 KB
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SSTI_F2Segregation.txt
8.94 KB
Dec 20, 2023 version files 114.49 KB
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20142015_SiteA_Monitoring.txt
7.02 KB
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2015_TyphoonEffect.txt
1.29 KB
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2020_Lateflowering_Morphology_SSTI.csv
2.22 KB
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2020_Mophology_SSTI.txt
24.26 KB
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20202021_SiteB_Monitoring.txt
8.22 KB
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20202021_Transplant.txt
2.27 KB
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2021_Lateflowering_Morphology_SSTI.csv
2.22 KB
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2021_Morphology_SSTI.txt
25.86 KB
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Daystoheading_F2Segregation.txt
9.20 KB
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Daystoheading_Lateflowering_Progeny.txt
3.57 KB
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Plantlength_F2Segregation.txt
6.47 KB
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README.md
4.18 KB
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SSTI_F2F3Correlation.txt
8.79 KB
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SSTI_F2Segregation.txt
8.94 KB
Abstract
This study aimed to determine how coastal variants of plants arise from local populations under natural selection by studying variations in phenotypic variations and survival of Setaria viridis populations inhabiting mosaic environments of two seashores in Japan. S.viridis populations comprised five coastal variants showing significantly higher salt spray tolerance than the inland variant: ST, short and tolerant (common variant); TM, tall and mid-tolerant (Inland Sea); TT, tall and tolerant; PT, prostrate and tolerant; L, extremely late flowering; I, inland and susceptible variants. These variations imply that maritime plants first acquired salt spray tolerance for survival, after which compact plants evolved in habitats where strong winds caused damage from salt spray. Results indicate that diverse intensities of salt spray and winds as well as summer drought generated various coastal variations in parapatry and sympatry.
File list and description
1 2020_Morphology_SSTI.txt
Results of common garden experiments in 2020 for individuals from various habitats at three localities. Morphological traits and salt spray tolerance (SSTI) were examined. Collection sites: A (Maruyama island in the Seto Inland Sea), B (Cape Muroto facing the Pacific Ocean), and C (Cape Naruto facing the Pacific Ocean). Habitats: Site A (SS, sandy shore; HL, hinterland), Site B (PS, pebble shore; RC, rock crack), C (FG, flower garden; RC, rock cliff).
Measured traits:
- DayTH, days to heading;
- PL, plant length (cm);
- PaL, panicle length (cm);
- PaW, panicle width (cm);
- CL, culm length (cm);
- FLL, flag leaf length (cm);
- SLL, second leaf length (cm);
- 1INTL, first internode length (cm);
- 1SL, first sheath length (cm);
- 2INTL, second internode length (cm);
- 2SL, second sheath length (cm);
- NoT, number of tillers;
- SSTI, salt spray tolerance index (1 to 6).
2 2021_Morphology_SSTI.txt
Results of common garden experiments in 2021 for individuals from various habitats at two localities. Measurements and abbreviations are as in file 1.
3 2020_Lateflowering_Morphology_SSTI.csv
Results of common garden experiments in 2020 for late flowering individuals from pebble shore and rock cracks at Site B (Cape Muroto). Measurements and abbreviations are as in file 1.
4 2021_Lateflowering_Morphology_SSTI.csv
Results of common garden experiments in 2020 for late flowering individuals from pebble shore and rock cracks at Site B (Cape Muroto). Measurements and abbreviations are as in file 1.
5 20202021_Transplant.txt
Results of transplant experiments of four coastal and inland variants of S. viridis at the cliff and inland in 2020 and 2021. Survival rate (SurvRate (%)), number of panicles per plant (NOPan/plant), and total dry weight (TDW/plant (g)) were recorded. Five variants differing in plant size and salt spray tolerance were as follows: ST, short and tolerant (common variant); TM, tall and mid-tolerant (Inland Sea); TT, tall and tolerant; PT, prostrate and tolerant; L, extremely late flowering; I, inland and susceptible variants.
6 20202021_siteB_Monitoring.txt
Monitoring by mapping individuals in pebble shore and rock cracks at Cape Muroto in 2020 and 2021. Number of plants/quadrate (NOPlant), number of flowering plants/quadrate (NOFlower), survival rate (SurvRate (%)) and flowering rate (FlowerRate (%)) were recorded at every observation time. Data from Site B for April and May 2020 and April 2021 were lacking due to the travel restrictions enforced during the COVID-19 pandemic.
7 20142015_siteA_Monitoring.txt
Monitoring by mapping individuals on the sandy shore and hinterland at Maruyama Island in 2014 and 2015. Records were as file 6. Abbreviations of variants are as in file 5.
8 2015_TyphoonEffect.txt
Effects of typhoon GONI hit on 26 August 2015 on the survival of individuals on the sandy shore and hinterland at Maruyama Island. Numbers of living plants/quadrate (NOLiving) were shown before and after a typhoon touched down to calculate the number of plants destroyed by the typhoon (NODead).
9 SSTI_F2Segregation.txt
Segregations of four F2 populations in salt spray tolerance (SSTI). Abbreviations of variants are as in file 5.
10 Plantlength_F2Segregation.txt
Segregations of four F2 populations in plant length. Abbreviations of variants are as in file 5.
11 Daystoheading_F2Segregation.txt
Segregations of four F2 populations in days to heading. Abbreviations of variants are as in file 5.
12 SSTI_F2F3Correlation.txt
Correlations of two F2 and F3 populations in salt spray tolerance (SSTI). Abbreviations of variants are as in file 5.
13 Daystoheading_Lateflowering_Progeny.txt
Days to the heading of the progeny of individuals flowering at an intermediate time between normal flowering plants and extremely late flowering plants (L variant). The late and normal flowering plants (L and PT variants) were used as standards.
To identify adaptive traits, common garden experiments were performed to determine the variations in morphology, salt spray tolerance, and flowering time among populations in four adjacent habitats at two localities. To determine selective agents and their adaptation, field transplant experiments were performed for inland and coastal variants. Population dynamics and flowering phenology were monitored to detect damage from seasonal selections. Finally, the inheritance of adaptive traits was tested by examining the variation in adaptive traits of four F2 populations.