Data from: Tracking free water in human body by magnetic resonance imaging: New insights on the network pathways
Data files
Apr 01, 2025 version files 14.17 MB
-
README.md
1.33 KB
-
sample_data.zip
14.17 MB
Abstract
Water is the most indispensable material for life. Although extensive research has been carried out at the microscopic level, including studies focusing on transport and molecular effects, the macroscopic water system of the human body is still unclear. In this study, the distribution of free water in the human body under natural conditions was non-invasively depicted by magnetic resonance hydrography sequences. Spatial saturation technique was used to explore the dynamic properties of free water. Imaging and post-processing results reveal that abundant free water formed a macroscopic network consisting of interconnected pathways. The slow-flow trajectories of some waterways were captured in the saturation band. The free water channels enclosed or bordered the space around blood vessels and nerves or traversed the tissues. This spatial relationship is similar to the fluid flow patterns in the interstitial space in the periphery and the glymphatic system of the brain, suggesting potential physiological functions and pathological variations.
https://doi.org/10.5061/dryad.dncjsxm7z
Description:
We used magnetic resonance (MR) hydrography (MRF) to capture the free water network in the human body under natural state. Implementation steps and parameters were described in detail in associated publication. The original sequence data contained subject information. For privacy reasons, we only presented the imaging results here, in the form of video. The reproduction of the imaging results could be realized in the MR unit by referring to the sequence and parameter selection given in the publication.
Files:
- Folder s1/s2/s3 :
Free water imaging videos from three anonymous subjects. - Folder knee/nape :
Observation sites of free water in human body. - Mp4 3D_‘sequencename’_MIP :
Common 3D MR sequences after maximum intensity projection (MIP), including NerveView, time-of-flight (TOF) artery, and TOF vein. Details can be found in publication. - Mp4 MRF_with/without_saturationband_MIP :
MRF sequence was proposed for free water imaging. Saturation bands were introduced for exploratory experiments to characterize the dynamics of free water. Details can be found in publication.
The scanning process and imaging parameters of MRI are described in the related paper. The raw data is in DICOM format and contains personal information about the subjects. In order to protect the privacy of human subjects and comply with their wishes, we present part of the (2D) scan results in the form of video. The sequences are further reconstructed in 3D, and the video can be found in the supplementary material. One of this work's contributions is the establishment of standardized free water scanning processes, which can help researchers conduct validation and generalization.