Phylogenetic position and stratigraphic uncertainty of a new flexible crinoid from the Ordovician–Silurian boundary of Anticosti Island (Quebec, Canada)
Data files
May 22, 2025 version files 14.41 KB
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Flexibles_phylogenetic_analyses.nex
12.52 KB
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README.md
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Abstract
Fossil crinoids from the Ordovician–Silurian boundary interval (~ 443.8 million years) are known from relatively few locations worldwide due to a near-global unconformity that formed from eustatic sea level fall. This rock record bias has severely hindered study of the timing, magnitude, biogeographic signature, and extinction mechanisms of the Late Ordovician mass extinction (LOME). Crinoids underwent a significant faunal transition between the Late Ordovician and early Silurian that resulted in major shifts between dominant clades, but the driving mechanisms and precise timing of this transition remain unclear. Anticosti Island (Quebec, Canada) preserves one of the few Late Ordovician–early Silurian successions of highly fossiliferous, shallow-water rocks that includes the O–S boundary, making fossils from this region instrumental for better understanding the LOME and Ordovician–Silurian crinoid faunal turnover.
Here, we report on a new flexible crinoid, Anticosticrinus natiscotecensis n. gen. n. sp., from the Ordovician-Silurian boundary of Anticosti Island. Phylogenetic analysis of Middle Ordovician-early Silurian flexibles recovers Anticosticrinus natiscotecensis n. gen. n. sp. as a member of Family Anisocrinidae. We quantified stratigraphic age uncertainty of A. natiscotecensis using a Bayesian approach for estimating tip-occurrence times in a phylogenetic context. Although results do not provide unequivocal support for the specimen’s precise stratigraphic age, the maximum a posteriori estimate indicates a late Hirnantian age. Regardless of its true age, recognition of Anticosticrinus natiscotecensis provides additional data for evaluating the timing of extinction in flexible crinoids, their diversification and increasing dominance during the Silurian, and crinoid faunal turnover between the Ordovician and Silurian.
Dataset DOI: 10.5061/dryad.dz08kps8b
Description of the data and file structure
Nexus file containing character data for 25 species of flexible crinoids and commands to conduct the three phylogenetic analyses presented in: Cole, Wright, and Hopkins, Phylogenetic position and stratigraphic uncertainty of a new flexible crinoid from the Ordovician-Silurian boundary of Anticosti Island (Quebec, Canada), Journal of Paleontology.
Files and variables
File: Flexibles_phylogenetic_analyses.nex
Description: This nexus file includes a summary of the characters and character states associated with the matrices/analyses; and character data and commands to run the following three phylogenetic analyses:
(1): Maximum parsimony (PAUP*)
(2): Bayesian inference (topology only; MrBayes)
(3): Bayesian fossil tip-dating (divergence time estimation; MrBayes)
To run an analysis from the .nex file, be sure that the correct matrix and commands have their brackets (i.e., []’s) removed,
then execute the .nex file in the appropriate program (PAUP* or MrBayes).
Code/software
Programs needed to execute phylogenetic analyses are:
- PAUP* v4.0a149 (Swofford, 2003) for the parsimony analysis
- MrBayes 3.2.6 (Ronquist et al., 2012) for the Bayesian inference and Bayesian fossil tip-dating analyses
References:
Swofford, D.L., 2003, PAUP: phylogenetic analysis using parsimony (and other methods), version 4: Sinauer Associates, MA.
Ronquist, F., Klopfstein, S., Vilhelmsen, L., Schulmeister, S., Murray, D.L., and Rasnitsyn, A.P., 2012, A Total-Evidence Approach to Dating with Fossils, Applied to the Early Radiation of the Hymenoptera: Systematic Biology, v. 61, p. 973–999.