Data from: β-aminobutyric acid-induced resistance in postharvest peach fruit involves interaction between the MAPK cascade and SNARE13 protein in salicylic acid-dependent pathway
Data files
Feb 18, 2025 version files 20.74 KB
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File2_raw_data_of_LCI.xlsx
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README.md
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Abstract
The inducer β-aminobutyric acid (BABA) is capable of immune response in various plants. However, the specific mitogen-activated protein kinase (MAPK) cascade involved in BABA-induced resistance (BABA-IR) has not yet been elucidated. Here, peach fruits treated with the BABA exhibited a pattern-triggered immunity (PTI) defense against Rhizopus stolonifer, accompanied by the generation of reactive oxygen species (ROS) and activation of MAPK cascade. Transcriptome sequencing suggested a total of fifteen PpMAPKKK/PpMAPKK/PpMAPK genes involved in BABA-IR in peach fruit. Further qRT-PCR analysis showed that the transcript profiles of PpMAPKKK3, PpMAPKK5 and PpMAPK1 were obviously potentiated. Subsequently, yeast two-hybrid (Y2H), luciferase complementation imaging (LCI), pull-down and in vitro phosphorylation assays were conducted to characterize the complete MAPK cascade (PpMAPKKK3-PpMAPKK5-PpMAPK1) involved in peach fruit. Moreover, the downstream events of MAPK1 include the involvement of SNARE13 and the corresponding NPR1-responsive defense. Single silencing of MAPKKK3, MAPKK5 or MAPK1 and double silencing of MAPKKK3/MAPKK5 or MAPKK5/MAPK1 resulted in enhanced susceptibility to the fungus R. stolonifer in mutants and attenuated salicylic acid (SA)-dependent defense gene expression; in contrast, the homologous or heterologous overexpression of PpSNARE13 in peach fruit or Arabidopsis led to an enhanced SA pool and elevated expression of PR genes. Reciprocally, the ppsnare13cas9 mutants are generally compromised in the priming of SA-dependent resistance. Therefore, the MAPKKK3-MAPKK5-MAPK1 cascade contributes to PTI signal transduction in BABA-elicited peach fruit, by combination with downstream events such as SNARE13, NPR1, and SA-dependent signaling.
https://doi.org/10.5061/dryad.fbg79cp37
Description of the data and file structure
1. Title of Dataset: Data from: β-aminobutyric acid-induced resistance in postharvest peach fruit involves interaction between the MAPK cascade and SNARE13 protein in salicylic acid-dependent pathway.
2. Author Information
Corresponding Investigator 1
Name: Prof Kaituo Wang
Institution: Institute of Fruit Function and Disease Management, Department of Public Health and Management, Chongqing Three Gorges Medical College, Chongqing 404000, P.R. China; College of Biology and Food Engineering, Chongqing Three Gorges University, Chongqing 404000, P.R. China
Email: kaituo_wang@sanxiau.edu.cn
Co-investigator 1
Name: Dr Chunhong Li
Institution: Institute of Fruit Function and Disease Management, Department of Public Health and Management, Chongqing Three Gorges Medical College, Chongqing 404000, P.R. China; College of Food Science and Technology, Nanjing Agricultural University, Nanjing 210095 Jiangsu, P.R. China
Co-investigator 2
Name: Dr Changyi Lei
Institution: College of Biology and Food Engineering, Chongqing Three Gorges University, Chongqing 404000, P.R. China
Co-investigator 3
Name: Dr Yanyu Zou
Institution: College of Food Science and Technology, Nanjing Agricultural University, Nanjing 210095 Jiangsu, P.R. China; College of Biology and Food Engineering, Chongqing Three Gorges University, Chongqing 404000, P.R. China; College of Food Science and Technology, Nanjing Agricultural University, Nanjing 210095 Jiangsu, P.R. China
Co-investigator 4
Name: Dr Sisi Yang
Institution: College of Biology and Food Engineering, Chongqing Three Gorges University, Chongqing 404000, P.R. China
Co-investigator 5
Name: Dr Fei Xiang
Institution: College of Biology and Food Engineering, Chongqing Three Gorges University, Chongqing 404000, P.R. China
Co-investigator 6
Name: Dr Meilin Li
Institution: College of Food Science and Technology, Nanjing Agricultural University, Nanjing 210095 Jiangsu, P.R. China; College of Food, Shenyang Agricultural University, Shenyang 110866 Liaoning, P.R. China
Co-investigator 7
Name: Prof Yonghua Zheng
Institution: College of Food Science and Technology, Nanjing Agricultural University, Nanjing 210095 Jiangsu, P.R. China
3. Date of data collection: 2020-2022
4. Geographic location of data collection: Chongqing, China
5. Funding sources that supported the collection of the data: National Natural Science Foundation of China
6. Recommended citation for this dataset: Li CH, Wang KT, Lei CY, Zou YY, Yang SS, Xiang F, Li ML, Zheng YH. 2025. Data from: β-Aminobutyric acid-induced resistance in postharvest peach fruit involves interaction between the MAPK cascade and SNARE13 protein in salicylic acid-dependent pathway. Dryad Digital Repository. https://doi.org/10.5061/dryad.fbg79cp37
DATA & FILE OVERVIEW
1. Description of dataset
These data were generated to investigate the combination of MAPK cascade and SNARE13 protein in BABA-induced resistance in postharvest peach.
the MAPKKK3-MAPKK5-MAPK1 cascade contributes to PTI signal transduction in BABA-elicited peach fruit, by combination with downstream events such as SNARE13, NPR1, and SA-dependent signalling.
2. File List:
File 1 Name: File1_Raw_images_of_DAB_staining__Y2H__LCI__pulldown__phosphorylation_assay__Co-ip__BiFC__expressor_and_mutants-Final.docx
File 2 Name: File2_raw_data_of_LCI.xlsx
File 1 includes the data:
ROS accumulation was detected by DAB staining and observed in the pulp of 24-, 48- and 72-hour-old peaches treated with the BABA formulation and/or R. stolonifer conidia (data in Figure 1 in published article).
The GAL4 DNA binding domain (BD) vectors fused PpMAPKKKs (PpMAPKKK1, PpMAPKKK2, PpMAPKKK3, PpMAPKKK5 and PpMAPKKK7) were transformed with the activation domain (AD) vectors fused PpMAPKKs (PpMAPKK2, PpMAPKK3, PpMAPKK5 and PpMAPKK9) into AH109 yeast cells or cotransformed into AH109 cells with BD-fused-PpMAPKK5 and AD-fused-PpMAPKs, and the transformed cells, including those on TDO (triple dropout media, SD/-Trp/-Leu/-His) and QDO (quadruple dropout media, SD/-Trp/-Leu/-His/-Ade), were further cultured on selection media supplemented with or without X-α-gal (data in Figure 4 in published article).
The indicated cLUC (PpMAPKKK3-cLUC or PpMAPKK5-cLUC) and nLUC (PpMAPKK5-nLUC or PpMAPK1-nLUC) constructs were transiently coexpressed in tobacco leaves for LCI assays; In vitro GST pull-down assays confirmed the interaction of PpMAPKK5 with PpMAPKKK3/PpMAPK1 using anti-His or anti-GST antibodies; In vitro kinase assay to detect the phosphorylation of PpMAPKK5 by PpMAPKKK3 and PpMAPK1 by PpMAPKK5. GST-PpMAPKKK3 was incubated with His-PpMAPKK5 or coincubated with GST-PpMAPKK5 and His-PpMAPK1 in kinase assay buffer, either in the presence (+) or absence (–) of ATP as indicated, and further detected by PhoS-tag SDS-PAGE (data in Figure 5 in published article).
Disease symptoms of representative ppmapkkk3cas9, ppmapkk5cas9 and ppmapk1cas9 mutant fruits and wild-type fruits (data in Figure 6 in published article).
The atmapkkk3cas9 and atmapkk5cas9 mutants display increased susceptibility to the fungus R. stolonifer. Disease symptoms were imaged 6 days after inoculation with R. stolonifer conidia; Disease lesions of atmapkkk3cas9 atmapkk5cas9 mutants were recorded 6 days after inoculation with R. stolonifer conidia; Assessment of fungal colonization in atmapkkk3cas9 atmapkk5cas9 mutants via trypan blue staining at 6 dpi (data in Figure 7 in published article).
Disease symptoms of the representative leaves of the mapkk5cas9 and mapk1cas9 mutants after punch inoculation with R. stolonifer conidia; Growth status and transcript levels of AtMAPKK5 and AtMAPK1 in four-week-old atmapkk5cas9 atmapk1cas9 double mutants; Disease symptoms, lesion diameter and relative fungal biomass of the representative leaves of the atmapkk5cas9 atmapk1cas9 mutant plants 6 days after inoculation with R. stolonifer; Level of fungal colonization in the trypan blue-stained leaves of atmapkk5cas9 atmapk1cas9 mutants and the related staining ratio 6 days after inoculation with R. stolonifer (data in Figure 8 in published article).
Y2H screening of the potential targets of the PpMAPK1 protein and characterization of the interaction; PpMAPK1 phosphorylates PpSNARE13 in the presence of ATP. His-PpMAPK1 was incubated with GST-PpSNARE13 in kinase assay buffer, and total protein was subjected to SDS-PAGE with phosbind acrylamide and detected by immunoblot analysis with an anti-GST antibody (data in Figure 9 in published article).
Coimmunoprecipitation assay to detect the in vivo interaction of PpSNARE13 with PpNPR1. Proteins isolated from tobacco leaves transfected with the indicated plasmid combinations were immunoprecipitated with the anti-GFP or anti-myc antibody. IP, immunoprecipitation; The BiFC assay revealed the interaction between PpSNARE13 and PpNPR1 in vivo in the nucleus (data in Figure 10 in published article).
Four-week-old Arabidopsis plants overexpressing PpSNARE13 in the growth chamber; Disease symptoms of the representative leaves of PpSNARE13 overexpression lines were imaged 6 days after punch-type inoculation with R. stolonifer; Qualitative determination of the fungal colonization level through trypan blue staining of PpSNARE13 overexpression lines at 6 dpi; The trypan blue staining ratio and fungal biomass of PpSNARE13 overexpression lines relative to those of Col-0 plants at 6 days after inoculation with R. stolonifer conidia (data in Figure 11 in published article).
Infection phenotypes of representative fruits of PpSNARE13-overexpressing and wild-type fruits; Lesion diameter, relative fungal biomass and trypan blue staining of representative fruits of PpSNARE13 overexpressors 2 d after inoculation (dai) (data in Figure 12 in published article).
Disease symptoms of the representative fruit of ppsnare13 mutants and wide type fruit; Lesion diameter and relative fungal biomass of the representative fruit of ppsnare13 mutants and wild-type fruit at 2 days after inoculation with R. stolonifer conidia; Trypan blue staining of representative fruits of ppsnare13 mutants 2 d after inoculation (data in Figure 13 in published article).
File 2 includes the data:
The indicated cLUC (PpMAPKKK3-cLUC or PpMAPKK5-cLUC) and nLUC (PpMAPKK5-nLUC or PpMAPK1-nLUC) constructs were transiently coexpressed in tobacco leaves for LCI assays. (data in Figure 5 in published article).
METHODOLOGICAL INFORMATION
Peach fruit with an identical size, maturity and no visual mechanical damage was surface-sterilized for 2 min in 75 % alcohol, dried at 20 °C for approximately 2 h and divided into four subsets of 360 fruit each. Two 3-mm-deep and 3-mm-diameter holes were punched by sterilized dissecting needles at the centre of symmetry of each fruit. The optimal concentration of BABA (Sigma Co, MO, USA) at 50 mmol/L was selected. Then, different conditions were applied to each wound of each fruit from the four sets: 1) treatment with 20 μL of ddH2O (Control); 2) pre-treatment with an aqueous solution of 50 mmol/L BABA (BABA); 3) inoculation with R. stolonifer spore suspension at a 1.0 × 105 spores/mL concentration (Inoculation); and 4) pre-treatment with 50 mmol/L BABA followed by the fungal inoculation (BABA + inoculation). Following the treatments, all fruit were distributed on consoles for at least 5 h and were further seal-packaged in polyethylene (PE) film (0.06 mm in thickness) and stored at 20 °C for up to 72 hours. At each 12-hour interval from 0 to 72 hours, 30-50-gram samples of the uninfected sarcocarp (2 mm away from the infected area) from 60 fruit in each subset were collected. Fruit pulps from each individual were flash frozen with liquid nitrogen and stored at -80 °C until use. The experiment was laid out twice in a completely randomized design with three replicates per treatment.
The* PpMAPKKK3*/PpMAPKK5 and PpMAPKK5/PpMAPK1 cDNAs were inserted into the pCAMBIA1300-cLUC and pCAMBIA1300-nLUC vectors, respectively, using the primers provided in Table S1. The combinations (PpMAPKKK3-cLUC + PpMAPKK5-nLUC, PpMAPKKK3-cLUC + nLUC, cLUC + PpMAPKK5-nLUC or PpMAPKK5-cLUC + PpMAPK1-nLUC, PpMAPKK5-cLUC + nLUC, cLUC + PpMAPK1-nLUC) were expressed in tobacco plants via Agrobacterium tumefaciens-mediated transformation (ATMT). The LUC signals and activities of the injected N. tabacum plants were recorded after 2-3 days of cultivation under a circadian photoperiod at 22 °C, in which the combination of AtFLS2-nLUC + AtAGB1-cLUC were treated as positive control.