Developmental exposures to three mammalian teratogens produces dysmorphic phenotypes in adult Caenorhabditis elegans.
Data files
Jul 09, 2025 version files 7.41 GB
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5-fluorouracil.zip
2.18 GB
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Example_Images_Originals.zip
4.40 MB
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hydroxyurea.zip
2.63 GB
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README.md
7.71 KB
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ribavirin.zip
2.60 GB
Abstract
Adult morphology was assessed at sublethal concentrations in C. elegans using three mammalian teratogens, 5-fluorouracil (5FU), hydroxyurea (HU), or ribavirin (RV). C. elegans develop from egg to adult with internal eggs in about 70h at 20°C in C. elegans Habitation Medium (CeHM). Cohorts were exposed from first feeding after hatching for either 24h (early-only) or continuously for four days. Significant increases in the percentage of prolapsed individuals were seen on the first day of adulthood in both continuous and early-only 5FU and HU exposure groups. In contrast, continuous RV exposures induced gonad arm and vulval anomalies that were largely but not completely reversed in the early-only exposure groups. Reductions in reproductive output with continuous exposures recovered, though not fully, with early-only exposures for all three chemicals. To our knowledge, this is the first systematic evaluation of C. elegans morphology changes induced by mammalian teratogens. These data suggest that C. elegans may be a useful model for detecting chemicals with human teratogenic potential, but further studies using larger chemical test panels are needed.
Dataset DOI: 10.5061/dryad.j3tx95xs9
Description of the data and file structure
As required by Dryad, this image data set is submitted to the public domain without restrictions or conditions for reuse, modification, or redistribution.
5-fluorouracil (5FU), hydroxyurea (HU), and ribavirin (RV) are mammalian teratogens that also cause growth retardation in mammals and toxicological model organisms, including C. elegans. The effects of 5FU, HU, and RV on C. elegans adult morphology were evaluated after continuous and 24h (early-only) exposures beginning from first feeding after hatching.
Data: the images are .jpg files, organized in folders by chemical, experiment number, exposure duration, and exposure concentration.
Data description:* C. elegans* cohorts were exposed to sublethal concentrations of three mammalian teratogens from first feeding after hatching for either 24h (early-only, wDATe) or four days (continuous, wDATc). Culture maintenance and exposures were in C. elegans Habitation Medium (CeHM) in 12-well plates in 20°C incubators without shaking. Four independent experiments were conducted with randomized well placement in 12-well plates. Microscopy images for later phenotypic analysis were captured on day four post-initiation of L1 feeding when controls were adults with young progeny. Worms were immobilized with sodium azide and imaged directly in CeHM nutrient medium to avoid breakup of fragile phenotypes. A Keyence (Itasca, IL, USA) automated stage microscope was used for image capture of one well per condition per experiment with a 4x objective, and the center of each well with a 10x objective.
The images are .jpg files, organized in folders (5-fluorouracil.zip, hydroxyurea.zip and ribavirin.zip) by chemical (5-fluorouracil, hydroxyurea, or ribavirin), experiment number (1-4), and exposure concentration in micrograms per mL. The Example_Images_Originals.zip folder contains the original full images used as examples in figures in manuscript toxics-3687520. These images were edited and cropped for clarity in the manuscript and made available here as originals for full transparency
Files and variables
File: 5FU_ex1_wDATc_4x
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to 5-fluorouracil. Experiment 1, 4x images captured on day 4 post-ffah.
File: 5FU_ex1_wDATc_10x
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to 5-fluorouracil. Experiment 1, 10x images captured on day 4 post-ffah.
File: 5FU_ex1_wDATe_4x
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to 5-fluorouracil. Experiment 1, 4x images captured on day 4 post-ffah.
File: 5FU_ex1_wDATe_10x
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to 5-fluorouracil. Experiment 1, 10x images captured on day 4 post-ffah.
File: 5FU_ex2_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to 5-fluorouracil. Experiment 2, 4x & 10x images captured on day 4 post-ffah.
File: 5FU_ex2_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to 5-fluorouracil. Experiment 2, 4x & 10x images captured on day 4 post-ffah.
File: 5FU_ex3_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to 5-fluorouracil. Experiment 3, 4x & 10x images captured on day 4 post-ffah.
File: 5FU_ex3_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to 5-fluorouracil. Experiment 3, 4x & 10x images captured on day 4 post-ffah.
File: 5FU_ex4_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to 5-fluorouracil. Experiment 4, 4x & 10x images captured on day 4 post-ffah.
File: 5FU_ex4_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to 5-fluorouracil. Experiment 4, 4x & 10x images captured on day 4 post-ffah.
File: HU_ex1_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to hydroxyurea. Experiment 1, 4x & 10x images captured on day 4 post-ffah.
File: HU_ex1_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to hydroxyurea. Experiment 1, 4x & 10x images captured on day 4 post-ffah.
File: HU_ex2_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to hydroxyurea. Experiment 2, 4x & 10x images captured on day 4 post-ffah.
File: HU_ex2_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to hydroxyurea. Experiment 2, 4x & 10x images captured on day 4 post-ffah.
File: HU_ex3_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to hydroxyurea. Experiment 3, 4x & 10x images captured on day 4 post-ffah.
File: HU_ex3_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to hydroxyurea. Experiment 3, 4x & 10x images captured on day 4 post-ffah.
File: HU_ex4_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to hydroxyurea. Experiment 4, 4x & 10x images captured on day 4 post-ffah.
File: HU_ex4_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to hydroxyurea. Experiment 4, 4x & 10x images captured on day 4 post-ffah.
File: RV_ex1_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to ribavirin. Experiment 1, 4x & 10x images captured on day 4 post-ffah.
File: RV_ex1_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to ribavirin. Experiment 1, 4x & 10x images captured on day 4 post-ffah.
File: RV_ex2_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to ribavirin. Experiment 2, 4x & 10x images captured on day 4 post-ffah.
File: RV_ex2_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to ribavirin. Experiment 2, 4x & 10x images captured on day 4 post-ffah.
File: RV_ex3_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to ribavirin. Experiment 3, 4x & 10x images captured on day 4 post-ffah.
File: RV_ex3_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to ribavirin. Experiment 3, 4x & 10x images captured on day 4 post-ffah.
File: RV_ex4_wDATc
Description: C. elegans continuously exposed for 4 days from first feeding after hatching (ffah) to ribavirin. Experiment 4, 4x & 10x images captured on day 4 post-ffah.
File: RV_ex4_wDATe
Description: C. elegans exposed for 24h from first feeding after hatching (ffah) to ribavirin. Experiment 4, 4x & 10x images captured on day 4 post-ffah.
Code/software
Files contain images. Any software program compatible with .jpg files will allow viewing of images.
Access information
Other publicly accessible locations of the data:
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Data was derived from the following sources:
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The C. elegans wild-type N2 strain was obtained from the Caenorhabditis Genetics Center, which is funded by NIH Office of Research Infrastructure Programs (P40 OD010440). Continuously well-fed cultures were maintained and exposed in CeHM as previously described (DOI: 10.1002/jat.4525). Sublethal concentrations that allowed for at least semi-synchronous developmental timing within exposed cohorts were previously determined (DOI: 10.1016/j.taap.2024.117108). For continuously exposed C. elegans, synchronized newly hatched cohorts were counted and diluted to approximately 1,000 first larval stage (L1) worms per mL CeHM, then 900 µL worms in CeHM were transferred to 12-well plates and 100 µL of 10x aqueous dosing solution was added per well within 30 min post-first-feeding after hatching. Plates were maintained in 20°C incubators for four days. For early-only exposures, the following alterations were made: after 24.5h +/-30min exposures, C. elegans cohorts were quickly washed first in 14mL water, then in 15mL M9 buffer, for a total of no more than 10 min without food, then resuspended in 1mL fresh CeHM per well and returned incubators for an additional 3 days. Four independent experiments were conducted, each consisting of a fresh preparation of dosing solutions and C. elegans L1 cohorts. On day four post-L1 feeding and dosing when control populations were adults with early-stage progeny, C. elegans populations were immobilized for imaging with sodium azide directly in CeHM. Washing and pipetting onto slides was not done due to the fragility of some phenotypes. Plates were transferred to a Keyence (Itasca, IL, USA) automated stage microscope for image capture with a 4x objective of the whole well and 10x objective of the center of the well.