Data from: Quantifying the contribution of community trait mean and diversity to ecosystem functioning
Data files
Jul 15, 2025 version files 4.32 KB
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README.md
2.62 KB
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Trait-based_CAFE_data.csv
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Abstract
Hundreds of experiments conducted over the last decades demonstrate a positive relationship between species diversity and ecosystem functions. Following good experimental practice, most of these studies have manipulated species richness artificially by assembling communities randomly. Yet, natural communities along ecological gradients often show niche-based responses to selection gradients, and species extinction order is generally not a random process. Such responses are commonly trait-mediate,d and the effects of communities on ecosystems’ functions also depend on species traits. In an effort to disentangle the relationship of trait mean value and diversity with ecosystem functioning, we revisited a community assembly mesocosm experiment that simulated habitat heterogeneity and a typical gradient of productivity to test how body size diversity and composition of cladocerans responded to such gradients and whether and how such trait responses impacted top-down control of unicellular algae, a key ecosystem function in aquatic systems. Nutrient addition lead to an increase in average body size (CWMBS), which ultimately resulted in an increased zooplankton resource use efficiency (RUEZP). This increase in CWMBS acted as a buffer for ecosystems functions despite the decline in species richness under high phosphorus levels. Habitat heterogeneity modified the response of both richness and size diversity (SD) along the nutrient gradient, suggesting that habitat structure provided by aquatic plants can modify zooplankton diversity under eutrophic conditions. We also show that CWMBS and SD are both important and largely independent determinants of variation in RUEZP, whereas the explanatory power of species richness was mostly shared with SD. Overall, our findings illustrate the potential for a key trait, such as body size, to predict top-down control of algae through selection effect mediated by differences in trait mean, as well as complementarity associated with trait diversity among coexisting species.
https://doi.org/10.5061/dryad.nzs7h4502
The dataset consist in a subset of the data from a metacommunity assembly experiment performed by Declerck et al. (2007; https://doi.org/10.1890/07-0048.1). In our study, a multifactorial combination of nutrient concentrations and habitat complexity levels was performed using cattle tanks (200-L) under semi-standardized outdoor conditions (ARENA outdoor experimental area, Heverlee, Belgium). The experiment lasted 32 days following a 34-day inoculation/acclimatation period. In the experimental design, for each level of habitat heterogeneity (i.e., with and without artificial macrophytes) by nutrient concentration (i.e., 0, 10, 100, and 1000 µg L-1), five replicates were used, resulting in a total of 40 cattle tanks. For further details about the experimental design, see Declerck et al. (2007; https://doi.org/10.1890/07-0048.1).
Description of the data and file structure
The dataset "Trait-based_CAFE_data" includes data relative to the sampling of zooplankton density (Density_zoo; org L-1), biomass (Biom_zoo; µg L-1), resource use efficiency (RUEzp_D65), richness (S), community average size (CAS_dens; mm), and size diversity (SDshn_dens). The datapoints are identified based on unique sampling identification (Id), habitat heterogeneity treatment (NPL - without macrophytes, or APL - with artificial macrophytes), phosphorus addition levels (0, 10, 100, and 1000), and replicates (A, B, C, E). Note that replicate D was excluded due to missing datapoints. All diversity metrics were calculated using density matrix and all analyses were done using Chlorophyll-a of day 65.
Sharing/Access information
Links to other publicly accessible locations of the data:
Data was derived from the following sources:
- Declerck S., M. Vanderstukken, A. Pals, K. Muyleart, and L. De Meester. 2007. Plankton biodiversity along a gradient of productivity and its mediation by macrophytes. Ecology 88: 2199–2210 (https://doi.org/10.1890/07-0048.1).
Code/Software
The R code provided shows the data analyses undertaken to assess how environmental pressures related to eutrophication and loss of habitat heterogeneity influence a key ecosystem function through its impacts on zooplankton community features.