Predictably manipulating photoreceptor light responses to reveal their role in downstream visual responses
Data files
Nov 01, 2024 version files 41.49 MB
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Figure2-SourceData1.mat
41.49 MB
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README.md
1.36 KB
Abstract
Computation in neural circuits relies on the judicious use of nonlinear circuit components. In many cases, multiple nonlinear components work collectively to control circuit outputs. Separating the contributions of these different components is difficult, and this limits our understanding of the mechanistic basis of many important computations. Here, we introduce a tool that permits the design of light stimuli that predictably alter rod and cone phototransduction currents - including stimuli that compensate for nonlinear properties such as light adaptation. This tool, based on well-established models for the rod and cone phototransduction cascade, permits the separation of nonlinearities in phototransduction from those in downstream circuits. This will allow, for example, direct tests of how adaptation in rod and cone phototransduction affects downstream visual signals and perception.
https://doi.org/10.5061/dryad.q2bvq83vg
Description of the data and file structure
Primate and mouse cone responses
These are normalized currents - i.e., the measured current (voltage-clamp recording) normalized by the dark current estimated from a saturating flash.
Currents are averages of 4-5 repeats of the same stimulus. The file contains responses to the variable mean noise stimulus, in which the mean intensity is changed every 500 ms (primate) or 1s (mouse).
Stimulus units are R*/sec
The time step is 0.1 ms
Primate and mouse rod responses
These are normalized currents - i.e., the measured current (voltage-clamp recording) normalized by the dark current estimated from a saturating flash.
Currents are averages of 4-5 repeats of the same stimulus. The file contains (in order) responses to a family of steps with superimposed flashes, a family of flashes from darkness, and the variable mean noise stimulus (intensity changed every 4 s).
Stimulus units are R*/sec
The time step is 1 ms
Files and variables
File: Figure2-SourceData1.mat
Description:
Variables
- PrimateConeResponses
- MouseConeResponses
- PrimateRodResponses
- MouseRodResponses