Optimal vaccination at high reproductive numbers: sharp transitions and counterintuitive allocations
Data files
Sep 15, 2022 version files 15.13 KB
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BEL_data.mat
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BRA_data.mat
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CHN_data.mat
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ESP_data.mat
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IND_data.mat
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ISR_data.mat
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POL_data.mat
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README.utf8
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US2_data.mat
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USA_data.mat
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ZAF_data.mat
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ZWE_data.mat
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Abstract
The MATLAB source code, including all data and parameters used to produce the graphs presented in this work, is available on GitHub at https://github.com/NGavish/HighR0 or Zenodo at https://doi.org/10.5281/zenodo.6962689.
The contact matrices used in the code were obtained from [Citation 28; PLOS Computational Biology, e1009098]. There are provided as .mat files under the subdirectory /CountryData and under the names xxx_data.mat where xxx is the country code.
Pre-computed data files are provided as .mat files under the subdirectory /data. By default, the graphs are produced from pre-computed simulation output. See Usage Notes for instructions on producing the graphs without relying on these pre-computed data files.
The file main.m produces all graphs presented in this work. By default, the graphs are produced from pre-computed simulation output. To run a full computation of simulations modify line 11 of main.m.