The metabolic costs of meiotic drive
Data files
May 22, 2025 version files 36.92 KB
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diet.csv
10.27 KB
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maven2.csv
17.97 KB
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oroboros.csv
4.43 KB
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README.md
4.25 KB
Abstract
Selfish genetic elements, such as meiotic drive genes, disrupt Mendel’s law of equal segregation by biasing their own transmission, often at a detriment to the rest of the genome. Metabolic costs of the X-linked sex-ratio (SR) meiotic drive were investigated in stalk-eyed flies (Teleopsis dalmanni). The experiments demonstrate that individuals with SR have reduced capacity for ATP synthesis. The disruption in mitochondrial function leads to compensation exhibited in increased basal metabolic rate and greater food consumption across a range of diets. The range of metabolic costs of drive was evident in males and females at a similar magnitude. The likely cause lies in the accumulation of deleterious mutations within the series of large inversions on the drive X chromosome, subject to low recombination and weak natural selection. In females, the drive chromosome had a dominant effect, with a single copy causing substantial metabolic compromise. There was little evidence of male-specific metabolic costs, nor evidence of greater effects of drive chromosomes on female metabolism. This suggests that direct metabolic costs from meiotic drive on spermatogenesis and from sexually antagonistic selection are relatively weak. Our results underscore the broad physiological impacts that selfish genetic elements have on host metabolism and fitness.
Principal Investigator Contact Information
Name: Andrew Pomiankowski
Institution: UCL
Email: ucbhpom@ucl.ac.uk
Name: Flo Camus
Institution: UCL
Email: f.camus@ucl.ac.uk
Dataset Overview
Three experiments were carried out to compare metabolism in stalk-eyed flies (Teleopsis dalmanni), of both sexes, that carry wildtype or meiotic drive X chromosomes: (1) the oroboros dataset compares mitochondrial function through high-resolution respirometry, (2) the maven dataset compares whole-organism metabolic rate, (3) the diet dataset compares dietary consumption.
We have submitted data from our three experiments:
- High-resolution respirometry (oroboros.csv),
- Whole organism metabolic rate (maven2.csv),
- Diet consumption (diet.csv).
Descriptions
1. High-Resolution Respirometry_Data
A full description of the measurements made using high-resolution respirometry is available in the Supplementary Information of the paper. Thoracic tissue was extracted in buffer, and the homogenate was placed in an O2k fluorespirometer (Oroboros Instruments, Innsbruck, Austria), to which various substrates were added and respiratory states measured.
- Genotype:
- male genotypes: ST (XST/Y) or SR (XSR/Y);
- female genotypes: ST (XST/XST) or SR (XSR/XSR)
- sex: male or female
- protein.conc: mg/mL of protein
- N_L: LEAK state
- N_P: OXPHOS respiratory state sustained by Complex I
- Nc_P: Cytochrome c state
- NG_P: Glutamate state
- NGS_P: Succinate state
- NGSGp_P: Glycerophosphate state
- NGSGp_E: Maximum uncoupled respiration
- SGp_E: State after addition of Complex I inhibitor
- Gp_E: State after addition of Complex II inhibitor
- CIV: CIV activity
- ROX: ROX corrected for baseline state
- CI: Complex I activity
- RCR: N_P/N_L
2. Whole-Organism Respirometry_Data
Whole fly resting metabolic rate was measured using a MAVEn-FT (Multiple Animal Versatile Energetics Flow-Through System; Sable Systems International, USA). Individual flies were weighed and then placed into metabolic chambers coupled to an external CO? analyser (LICOR 850; LI-COR, USA). Fly activity was measured via the presence of 3 infrared beams below each chamber, recording movement every time the beams were broken. The system monitors 16 individual chambers consecutively, with three or four measurements for each chamber, over a 3-hour cycle.
- chamber: The MAVEn-FT has 16 chambers, one was left vacant as a control
- chamber.rep: Each chamber was measured 3-5 times (repeated measures)
- block: 8 replicates of 15 flies (sample size = 120)
- uniqueID: unique fly identifier
- sex: male or female
- Genotype:
- male genotypes: ST (XST/Y) or SR (XSR/Y);
- female genotypes: ST (XST/XST) or SR (XSR/XSR)
- Genotype1:
- male genotypes: ST (XST/Y) or SR (XSR/Y);
- female genotypes: ST (XST/XST) or SR (XSR/XSR + XSR/XST) <- this is pooled genotypes
- age: days since eclosion
- weight: weight of fly (mg)
- CO2: CO2 measurement (ul/min)
- activity: average bean crosses in 60 seconds
3. Diet consumption_Data
Food consumption was measured using a CApillary FEeder (CAFE) assay. Flies were placed singly in tubes with a glass capillary feeder filled with allocated diet
- box: three replicates were carried out
- ID: unique fly identifier
- treatment: dietary treatment. Three were used, which were: sugar water, low protein, and high protein
- Genotype:
- male genotypes: ST (XST/Y) or SR (XSR/Y);
- female genotypes: ST (XST/XST) or SR (XSR/XSR)
- Genotype1:
- male genotypes: ST (XST/Y) or SR (XSR/Y);
- female genotypes: ST (XST/XST) or SR (XSR/XSR + XSR/XST) <- this is pooled genotypes
- sex: male or female
- thorax: length of fly thorax (cm)
- total: total consumption (ml) over 60hrs
Code/Software
R is required to analyze our data; the script was created using version 4.2.3. We have provided an R-markdown file as part of our publication (Supplementary Information). Annotations are provided throughout the R-markdown script to recreate our results. This is from dataset loading/cleaning to analysis.