Data from: The interaction of phylogeny and community structure: linking the community composition and trait evolution of clades

Pearse WD, Legendre P, Peres-Neto PR, Davies TJ

Date Published: July 16, 2019

DOI: https://doi.org/10.5061/dryad.v26qd05

Files in this package

Content in the Dryad Digital Repository is offered "as is." By downloading files, you agree to the Dryad Terms of Service. To the extent possible under law, the authors have waived all copyright and related or neighboring rights to this data. CC0 (opens a new window) Open Data (opens a new window)

Title Supplementary Materials 1
Downloaded 1 time
Description Description of 'exact' methods to calculate clade-level significance and additional permutation tests of evolutionary model fitting.
Download si-1.pdf (134.7 Kb)
Details View File Details
Title Supplementary Materials 2
Downloaded 1 time
Description R code that calculates the variance metric we outline in our manuscript. This code will be incorporated in the R package 'pez', which is available on CRAN (under 'clade.var'); please use the 'pez' version as we will be more easily able to update and maintain the code there.
Download si-2-functions.R (1.384 Kb)
Details View File Details
Title Supplementary Materials 3
Downloaded 1 time
Description R code to run the simulations of our approach, as outlined in our manuscript.
Download si-3-simulations.R (6.821 Kb)
Details View File Details
Title Supplementary Materials 4
Downloaded 1 time
Description R code to run our empirical analyses, as outlined in our manuscript. Please note that this script is completely reproducible, and will download the empirical data the user needs to repeat our analyses.
Download si-4-empirical.R (4.574 Kb)
Details View File Details

When using this data, please cite the original publication:

Pearse WD, Legendre P, Peres‐Neto PR, Davies TJ (2019) The interaction of phylogeny and community structure: Linking the community composition and trait evolution of clades. Global Ecology and Biogeography. https://doi.org/10.1111/geb.12938

Additionally, please cite the Dryad data package:

Pearse WD, Legendre P, Peres-Neto PR, Davies TJ (2019) Data from: The interaction of phylogeny and community structure: linking the community composition and trait evolution of clades. Dryad Digital Repository. https://doi.org/10.5061/dryad.v26qd05
Cite | Share
Download the data package citation in the following formats:
   RIS (compatible with EndNote, Reference Manager, ProCite, RefWorks)
   BibTex (compatible with BibDesk, LaTeX)

Search for data

Be part of Dryad

We encourage organizations to: