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Matlab code to calibrate a structured-PDE model to data from in vitro experiments

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Dec 19, 2023 version files 35.79 KB

Abstract

Matlab code for the calibration of a PDE model of evolutionary dynamics of a well-mixed population of aggressive breast cancer cells from in vitro data on MCF7-sh-WISP2 cell line and bootstrapping for uncertainty quantification. For more details, see the associated publication: "Evolutionary dynamics of glucose-deprived cancer cells: insights from experimentally-informed mathematical modelling", by L. Almeida, J. Denis, N. Ferrand, T. Lorenzi, A. Prunet, M. Sabbah, C. Villa (corresponding author, author of code), 2024. The manuscript is published in the Journal of the Royal Society Interface, https://doi.org/10.1098/rsif.2023.0587