Ecological niche models (ENMs) have increasingly been used to estimate the potential effects of climate change on species’ distributions worldwide. Recently, predictions of species abundance have also been obtained with such models, though knowledge about the climatic variables affecting species abundance is often lacking. To address this, we used a well-studied guild (temperate North American quail) and the Maxent modeling algorithm to compare model performance of three variable selection approaches: correlation/variable contribution (CVC), biological (i.e., variables known to affect species abundance), and random. We then applied the best approach to forecast potential distributions, under future climatic conditions, and analyze future potential distributions in light of available abundance data and presence-only occurrence data. To estimate species’ distributional shifts we generated ensemble forecasts using four global circulation models, four representative concentration pathways, and two time periods (2050 and 2070). Furthermore, we present distributional shifts where 75%, 90%, and 100% of our ensemble models agreed. The CVC variable selection approach outperformed our biological approach for four of the six species. Model projections indicated species-specific effects of climate change on future distributions of temperate North American quail. The Gambel’s quail (Callipepla gambelii) was the only species predicted to gain area in climatic suitability across all three scenarios of ensemble model agreement. Conversely, the scaled quail (Callipepla squamata) was the only species predicted to lose area in climatic suitability across all three scenarios of ensemble model agreement. Our models projected future loss of areas for the northern bobwhite (Colinus virginianus) and scaled quail in portions of their distributions which are currently areas of high abundance. Climatic variables that influence local abundance may not always scale up to influence species’ distributions. Special attention should be given to selecting variables for ENMs, and tests of model performance should be used to validate the choice of variables.
GAQU_Current_Thresholds_PLOS
A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for Gambel's quail based on Maxent modeling.
GAQU_Future_Thresholds_PLOS
A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for Gambel's quail based on Maxent modeling.
MONQ_Current_Thresholds
A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for Montezuma quail based on Maxent modeling.
MONQ_Future_Thresholds
A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for Montezuma quail based on Maxent modeling.
MOUQ_Current_Thresholds_PLOS
A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for mountain quail based on Maxent modeling.
MOUQ_Future_Thresholds_PLOS
A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for mountain quail based on Maxent modeling.
CAQU_Current_Thresholds_PLOS
A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for California quail based on Maxent modeling.
CAQU_Future_Thresholds_PLOS
A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for California quail based on Maxent modeling.
NOBO_Current_Thresholds
A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for northern bobwhite based on Maxent modeling.
NOBO_Future_Thresholds
A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for northern bobwhite based on Maxent modeling.
SCQU_Current_Thresholds_PLOS
A ZIP file of 32 discrete TIFF layers indicating the current areas of environmental suitability for scaled quail based on Maxent modeling.
SCQU_Future_Thresholds_PLOS
A ZIP file of 32 discrete TIFF layers indicating the future areas of environmental suitability for scaled quail based on Maxent modeling.
CAQU_MPM
Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the California quail in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
GAQU_MPM
Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the Gambel's quail in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
MONQ_MPM
Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the Montezuma quail in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
MOUQ_MPM
Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the mountain quail in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
NOBO_MPM
Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the northern bobwhite in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
SCQU_MPM
Model performance metrics (AUC, test omission, and standardized test omission) for traditional (correlation/variable contribution [T]), biological (B), and five random (R1-R5) variable suites used to model the climatic niche of the scaled quail in Maxent. Ecological niche models were estimated across 100 replicates for each variable suite.
CAQU_REG
Test omission errors for ecological niche models estimated for the California quail in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
GAQU_REG
Test omission errors for ecological niche models estimated for the Gambel's quail in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
MONQ_REG
Test omission errors for ecological niche models estimated for the Montezuma quail in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
MOUQ_REG
Test omission errors for ecological niche models estimated for the mountain quail in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
NOBO_REG
Test omission errors for ecological niche models estimated for the northern bobwhite in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
SCQU_REG
Test omission errors for ecological niche models estimated for the scaled quail in which regularization multiplier values varied. Models were built based on the selection of the best variable suite (traditional [correlation/variable contribution], biological, or random) in Maxent. Ecological niche models were estimated across 100 replicates for each regularization multiplier value.
maxentResultsCAQU
Maxent output (excel file) for ecological niche models of the California quail estimated from the best variable suite and top performing regularization multiplier.
maxentResultsMONQ
Maxent output (excel file) for ecological niche models of the Montezuma quail estimated from the best variable suite and top performing regularization multiplier.
maxentResultsGAQU
Maxent output (excel file) for ecological niche models of the Gambel's quail estimated from the best variable suite and top performing regularization multiplier.
maxentResultsMOUQ
Maxent output (excel file) for ecological niche models of the mountain quail estimated from the best variable suite and top performing regularization multiplier.
maxentResultsNOBO
Maxent output (excel file) for ecological niche models of the northern bobwhite estimated from the best variable suite and top performing regularization multiplier.
maxentResultsSCQU
Maxent output (excel file) for ecological niche models of the scaled quail estimated from the best variable suite and top performing regularization multiplier.
caqu_bbs_a
Raster file of California quail abundance estimates derived from Breeding Bird Survey (BBS) data.
gaqu_bbs_a
Raster file of Gambel's quail abundance estimates derived from Breeding Bird Survey (BBS) data.
mouq_bbs_a
Raster file of mountain quail abundance estimates derived from Breeding Bird Survey (BBS) data.
nobo_bbs_a
Raster file of northern bobwhite abundance estimates derived from Breeding Bird Survey (BBS) data.
scqu_bbs_a
Raster file of scaled quail abundance estimates derived from Breeding Bird Survey (BBS) data.
caqumaxenteapnatureserve
Collated and spatially rarefied occurrence locations of California quail used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
gaqumaxenteapnatureserve
Collated and spatially rarefied occurrence locations of Gambel's quail used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
monq_maxentEAP
Collated and spatially rarefied occurrence locations of Montezuma quail used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
mouq_maxentfileEAP
Collated and spatially rarefied occurrence locations of mountain quail used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
nobomaxenteapnatureserve
Collated and spatially rarefied occurrence locations of northern bobwhite used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.
scqu_maxentfileeap
Collated and spatially rarefied occurrence locations of scaled quail used to create ecological niche models through Maxent. Data were collated from both Breeding Bird Survey and eBird databases.