Transcriptome dataset to: Chemical genetics in Silene latifolia elucidate regulatory pathways involved in gynoecium development

Bačovský, Václav1 ; Čegan, Radim1 ; Tihlaříková, Eva2 ; Neděla, Vilém2 ; Hudzieczek, Vojtěch1 ; Smrža, Lubomír1 ; Janíček, Tomáš1 ; Beneš, Vladimír3 ; Hobza, Roman1

Published Jul 30, 2021; Updated Dec 21, 2021 on Dryad. https://doi.org/10.5061/dryad.t1g1jwt2v

Data files

Jul 30, 2021 version files 74.92 GB

10B-1_1_sequence.fastq.gz

2.79 GB
10B-1_2_sequence.fastq.gz

2.85 GB
10B-3_1_sequence.fastq.gz

2.64 GB
10B-3_2_sequence.fastq.gz

2.69 GB
10B-4_1_sequence.fastq.gz

1.93 GB
10B-4_2_sequence.fastq.gz

1.98 GB
1C8-3-III-1_1_sequence.fastq.gz

2.37 GB
1C8-3-III-1_2_sequence.fastq.gz

2.39 GB
1C8-3-III-2_1_sequence.fastq.gz

2.06 GB
1C8-3-III-2_2_sequence.fastq.gz

2.25 GB
1C8-3-IIIa_1_sequence.fastq.gz

2.46 GB
1C8-3-IIIa_2_sequence.fastq.gz

2.48 GB
README_Dryad.txt

4.87 KB
U16F3_1_sequence.fastq.gz

2.37 GB
U16F3_2_sequence.fastq.gz

2.40 GB
U16F4_1_sequence.fastq.gz

2.64 GB
U16F4_2_sequence.fastq.gz

2.62 GB
U16F5_1_sequence.fastq.gz

2.19 GB
U16F5_2_sequence.fastq.gz

2.20 GB
U16M1_1_sequence.fastq.gz

3.63 GB
U16M1_2_sequence.fastq.gz

3.65 GB
U16M5_1_sequence.fastq.gz

2.14 GB
U16M5_2_sequence.fastq.gz

2.15 GB
U16M7_1_sequence.fastq.gz

2.39 GB
U16M7_2_sequence.fastq.gz

1.92 GB

Dec 21, 2021 version files 43.52 GB

10B-1_2_sequence.fastq.gz

2.85 GB
10B-3_1_sequence.fastq.gz

2.64 GB
10B-4_1_sequence.fastq.gz

1.93 GB
10B-4_2_sequence.fastq.gz

1.98 GB
1C8-3-III-1_1_sequence.fastq.gz

2.37 GB
1C8-3-III-1_2_sequence.fastq.gz

2.39 GB
1C8-3-III-2_1_sequence.fastq.gz

2.06 GB
1C8-3-III-2_2_sequence.fastq.gz

2.25 GB
1C8-3-IIIa_1_sequence.fastq.gz

2.46 GB
README_Dryad.txt

2.19 KB
U16F3_1_sequence.fastq.gz

2.37 GB
U16F3_2_sequence.fastq.gz

2.40 GB
U16F4_1_sequence.fastq.gz

2.64 GB
U16F4_2_sequence.fastq.gz

2.62 GB
U16F5_2_sequence.fastq.gz

2.20 GB
U16M1_2_sequence.fastq.gz

3.65 GB
U16M5_1_sequence.fastq.gz

2.14 GB
U16M5_2_sequence.fastq.gz

2.15 GB
U16M7_1_sequence.fastq.gz

2.39 GB

Abstract

This collection contains RNA-seq data obtained from young flower buds of Silene latifolia for each sample in the main manuscript in triplicate (male, female, two generations of hermaphrodites). The RNA was isolated from adult plants of U15 population and two subsequent generations, made by full-sib mating (U15=15 generations, U16=16 generations, U17=17 generations). The petals and sepals were removed before RNA-isolation. To avoid the bias made by sampling of old flower buds, only the first flowers were always sampled. The deposited RNA-seq data were not processed.

Transcriptome dataset to: Chemical genetics in Silene latifolia elucidate regulatory pathways involved in gynoecium development

Data files

Abstract

Methods

Usage notes

Works referencing this dataset