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Code and data for: The evolution of ontogenetic decision-making in the wood of a clade of tropical plants

Data files

Dec 06, 2023 version files 1.21 MB
Dec 07, 2023 version files 1.21 MB

Abstract

Code and data for reproducing the analysis from the manuscript "The evolution of ontogenetic “decision-making” in the wood of a clade of tropical plants". Data includes raw and curated data from cell lineages derived from wood progenitor cells. Python code is provided to generate virtual wood cell lineages using L-systems. It also provides code to determine number of words at different k-mer lengths and to estimate Shannon-Entropy and Lempel-Ziv values from the coded cell lineages. R code is provided to generate the plots and to adjust linear models of the maximum number of words based on total number of coded cells and mean cell lineage length.