#NEXUS [written Sun Nov 06 00:57:35 CET 2016 by Mesquite version 2.01 (build j28) at Koldik-PC/192.168.0.102] BEGIN TAXA; TITLE Untitled_Block_of_Taxa; DIMENSIONS NTAX=7; TAXLABELS 'G26_HE604105_MK1797' 'G26_HE604113_109bk' 'G26_U404' 'G26like_U400_KM352 ' 'G26like_U410' 'G26like_U25' G26like_U409 ; END; BEGIN CHARACTERS; TITLE Untitled_Character_Matrix; DIMENSIONS NCHAR=855; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX 'G26_HE604105_MK1797' ATCATTACCGAGTTTTT-CTACTCACCACTGTGAACGTTACCTGTTCTTCGGGTCTCAGGCCT----------------AGGCTGCAGGACCCGAAATAAACTACAACTTA-----GTAAATTTCTGAGGATTTAAAAAAAATAAATCAAAACTTTCAGCAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCGCCAGCACTCTGGCGGGCATGCCTGTCCGAGCGTCATTCAACCCTCAGCATAAGCTGGTGTTGGGGACGGCACATGCTTCTGCACGCGCCCCCCCC-GAAATCAATCGGCGGTCTCGTCGCGACCTCTGCGTAGT-ACAATCCTCGCAGCTGGAA-GCGGCTCGGCCTGCCAAAA-ACTCTCGCAAGAGACA--CCTTATGTTGACCTCGGATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCCTCAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCGACGCGCCTTCCGAGTTCCCTGGAACGGGACGCCAAAGAGGGTGAGAGCCCCGTCCGGTCGTGCGCCTAGCCTCTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATATCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAA 'G26_HE604113_109bk' ATCATTACCGAGTTTTT-CTACTCACCACTGTGAACGTTACCTGTTCTTCGGGTCTCAGGCCT----------------AGGCTGCAGGACCCGAAATAAACTACAACTTA-----GTAAATTTCTGAGGATTTAAAAAAAATAAATCAAAACTTTCAGCAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCGCCAGCACTCTGGCGGGCATGCCTGTCCGAGCGTCATTCAACCCTCAGCATAAGCTGGTGTTGGGGACGGCACATGCTTCTGCACGCGCCCCCCCC-GAAATCAATCGGCGGTCTCGTCGCGACCTCTGCGTAGT-ACAATCCTCGCAGCTGGAA-GCGGCTCGGCCTGCCAAAA-ACTCTCGCAAGAGACA--CCTTATGTTGACCTCGGATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCCTCAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCGACGCGCCTTCCGAGTTCCCTGGAACGGGACGCCAAAGAGGGTGAGAGCCCCGTCCGGTCGTGCGCCTAGCCTCTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATATCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC??????????????????? 'G26_U404' ATCATTACCGAGTTTTT-CTACTCACCACTGTGAACGTTACCTGTTCTTCGGGTCTCAGGCCT----------------AGGCTGCAGGACCCGAAATAAACTACAACTTA-----GTAAATTTCTGAGGATTTAAAAAAA-TAAATCAAAACTTTCAGCAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCGCCAGCACTCTGGCGGGCATGCCTGTCCGAGCGTCATTCAACCCTCAGCATAAGCTGGTGTTGGGGACGGCACATGCTTCTGCACGCGCCCCCCCCCGAAATCAATCGGCGGTCTCGTCGCGACCTCTGCGTAGT-ACAATCCTCGCAGCTGGAA-GCGGCTCGGCCTGCCAAAA-ACTCTCGCAAGAGACA--CCTTATGTTGACCTCGGATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCCTCAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCGACGCGCCTTCCGAGTTCCCTGGAACGGGACGCCAAAGAGGGTGAGAGCCCCGTCCGGTCGTGCGCCTAGCCTCTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATATCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAA 'G26like_U400_KM352 ' ATCATTACCGAGTTTTT-CTACTCACCACTGTGAACGTTACCTGTTCTTCGGGTCTCAAGCCT----------------AGGCTGCAGGACCCGAAATAAACTACAACTTA-----GTAAATTTCTGAGGATTTAAAAAAA-TAAATCAAAACTTTCAGCAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCGCCAGCACTCTGGCGGGCATGCCTGTCCGAGCGTCATTCAACCCTCAGCATAAGCTGGTGTTGGGGACGGCACATGCTTCTGCATGCGCCCCCCCC-GAAATCGATCGGCGGTCTCGTCGCGACCTCTGCGTAGT-ACAATCCTCGCAGCTGGAA-GCGGCTCGGCCTGCCAAAA-ACTCTCGCAAGAGA----CCTTATGTTGACCTCGGATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCCTCAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCGACGCGCCTTCCGAGTTCCCTGGAACGGGACGCCAAAGAGGGTGAGAGCCCCGTCCGGTCGTGCGCCTAGCCTCTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATATCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAA 'G26like_U410' ATCATTACCGAGTTTTTTCTACTCACCATTGTGAACGT-ACCTGTTCTTCGGGTCTCAGGCCTGGGCTGTTATGGCTCCAGGCTGCAGGACCCGAAATAAACTATAATTTT----AGTGAA--TCTGAGAATATAAAAAAA--TAATCAAAACTTTCAGCAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCGCCAGCACTCTGGCGGGCATGCCTGTCCGAGCGTCATTCAACCCTCAGCATA-GCTGGTGTTAGGGACGGCATATGCT-CTGCATGTGCCCCCCT--GAAATCAATTGGCGGTCTCGTCGCGACCTCTGCGTAGTTACAATCCTCGCAGCTGGAAAGCGGCTCGGCCTGCCCAAACACTCTCGCAAGAGAACATTATCATGTTGACCTCGGATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCATCAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCGACGCGCCTTCCGAGTTCCCTGGAACGGGACGCCAAAGAGGGTGAGAGCCCCGTCCGGTCGTGCGCCTAGCCTCTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATATCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAA 'G26like_U25' ????????????????????????????????????CGTACCTGTTCTTCGGGTCTCAGGCCTGGGCTGTTATGGCTCCAGGCTGCAGGACCCGAAATAAACTATAATTTT----AGTGAA--TCTGAGAATATAAAAAAA--TAATCAAAACTTTCAGCAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCGCCAGCACTCTGGCGGGCATGCCTGTCCGAGCGTCATTCAACCCTCAGCATA-GCTGGTGTTAGGGACGGCATATGCT-CTGCATGTGCCCCCCT--GAAATCAATTGGCGGTCTCGTCGCGACCTCTGCGTAGTTACAATCCTCGCAGCTGGAAAGCGGCTCGGCCTGCCCAAACACTCTCGCAAGAGAACATCACCATGTTGACCTCGGATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCATCAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCGACGCGCCTTCCGAGTTCCCTGGAACGGGACGCCAAAGAGGGTGAGAGCCCCGTCCGGTCGTGCGCCTAGCCTCTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATATCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAA G26like_U409 ATCATTACCGAGTTTTTTCTACTCACCATTGTGAACGT-ACCTGTTCTTCGGGTCTCAGGCCTGGGCTGTTATGGCTCCGGGCTGCAGGACCCGAAATAAACTATAATTTTTTTTAGTGAA--TCTGAGAATATAAAAAAA--TAATCAAAACTTTCAGCAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCGCCAGCACTCTGGCGGGCATGCCTGTCCGAGCGTCATTCAACCCTCAGCATA-GCTGGTGTTAGGGACGGCATATGCT-CTGCATGTGCCCCCCT--GAAATCAATTGGCGGTCTCGTCGCGACCTCTGCGTAGTTACAATCCTCGCAGCTGGAAAGCGGCTCGGCCTGCCCAAACACTCTCGCAAGAGAACATTATCATGTTGACCTCGGATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCATCAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCGACGCGCCTTCCGAGTTCCCTGGAACGGGACGCCAAAGAGGGTGAGAGCCCCGTCCGGTCGTGCGCCTAGCCTCTGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATACGTCTTCTAAAGCTAAATATCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGAAAAGAGGGTTAA ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 855; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 855; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 855; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 864693738164519417; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 2664293149285509087; checksum 0 2958717364 null; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #2664293149285509087 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 420 260; setLocation 8 8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleColorsPanel off; birdsEyeWidth 2; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; endTell; endTell; endTell; end;