Population S1 W1 S2 W2 S3 W3 Progenitor Progenitor_gene Progenitor_mutation hc_fixed hc_poly hc_total A10 0.401492243 1.401492243 0.426363451 1.426363451 0.318384171 1.318384171 CipR-6 marR marR_R94C 5 1 6 A12 0.106033528 1.106033528 -0.031766697 0.968233303 0.121116575 1.121116575 CipR-8 marR marR_R77H 2 1 3 A2 NA NA 0.298670903 1.298670903 0.212598055 1.212598055 CipR-1 gyrA gyrA_S83A 1 1 2 A4 0.250415089 1.250415089 0.277248178 1.277248178 0.283139471 1.283139471 CipR-2 marR marR_delta72_82 8 1 9 A6 0.351558283 1.351558283 0.258804461 1.258804461 0.25572269 1.25572269 CipR-3 gyrA gyrA_D87Y 1 1 2 A8 0.338423064 1.338423064 0.184924562 1.184924562 0.258061526 1.258061526 CipR-5 gyrA gyrA_D87G 1 0 1 B1 -0.120620477 0.879379523 0.232087598 1.232087598 0.159259084 1.159259084 CipR-2 marR marR_delta72_82 4 0 4 B11 0.137448219 1.137448219 0.263411357 1.263411357 0.326244642 1.326244642 CipR-1 gyrA gyrA_S83A 2 7 9 B3 0.208212472 1.208212472 -0.007641038 0.992358962 0.291866536 1.291866536 CipR-3 gyrA gyrA_D87Y 2 4 6 B5 0.385247594 1.385247594 0.036406035 1.036406035 -0.036177101 0.963822899 CipR-5 gyrA gyrA_D87G 1 2 3 B7 0.278560819 1.278560819 0.517803958 1.517803958 0.278335767 1.278335767 CipR-6 marR marR_R94C 2 1 3 B9 0.313812975 1.313812975 0.222640294 1.222640294 0.064917368 1.064917368 CipR-8 marR marR_R77H 1 1 2 C12 0.34533905 1.34533905 0.115317855 1.115317855 0.279171484 1.279171484 CipR-3 gyrA gyrA_D87Y 0 1 1 C2 0.344781276 1.344781276 -0.089058586 0.910941414 0.25342679 1.25342679 CipR-5 gyrA gyrA_D87G 1 2 3 C4 0.12892386 1.12892386 0.047376269 1.047376269 0.228233697 1.228233697 CipR-6 marR marR_R94C 3 3 6 C6 0.351254619 1.351254619 0.166873231 1.166873231 0.34708343 1.34708343 CipR-8 marR marR_R77H 1 1 2 C8 0.185943889 1.185943889 0.049530725 1.049530725 0.144550161 1.144550161 CipR-1 gyrA gyrA_S83A 3 4 7 D11 0.300708012 1.300708012 0.377057027 1.377057027 0.334020502 1.334020502 CipR-5 gyrA gyrA_D87G 1 1 2 D3 0.126410707 1.126410707 0.166112445 1.166112445 0.097307135 1.097307135 CipR-8 marR marR_R77H 1 3 4 D5 0.241580038 1.241580038 0.322563879 1.322563879 0.197719503 1.197719503 CipR-1 gyrA gyrA_S83A 0 3 3 D7 0.328917255 1.328917255 0.27016688 1.27016688 0.224957144 1.224957144 CipR-2 marR marR_delta72_82 1 1 2 D9 0.127434441 1.127434441 0.247938443 1.247938443 0.454912312 1.454912312 CipR-3 gyrA gyrA_D87Y 0 1 1 E10 0.461291278 1.461291278 0.361336847 1.361336847 0.066258442 1.066258442 CipR-6 marR marR_R94C 1 4 5 E12 0.368396661 1.368396661 0.3838472 1.3838472 0.222172283 1.222172283 CipR-8 marR marR_R77H 0 4 4 E2 0.381606136 1.381606136 0.078372199 1.078372199 0.24206113 1.24206113 CipR-1 gyrA gyrA_S83A 2 3 5 E4 0.18861043 1.18861043 0.074218481 1.074218481 0.129543971 1.129543971 CipR-2 marR marR_delta72_82 1 2 3 E6 0.381024184 1.381024184 0.138182345 1.138182345 NA NA CipR-3 gyrA gyrA_D87Y 0 3 3 E8 0.023616723 1.023616723 0.165338209 1.165338209 0.413280085 1.413280085 CipR-5 gyrA gyrA_D87G 1 1 2 F1 0.024901411 1.024901411 0.171789549 1.171789549 0.205521424 1.205521424 CipR-2 marR marR_delta72_82 1 2 3 F11 0.351135114 1.351135114 0.467441793 1.467441793 0.167222604 1.167222604 CipR-1 gyrA gyrA_S83A 1 2 3 F3 0.170528077 1.170528077 0.119463236 1.119463236 0.287390524 1.287390524 CipR-3 gyrA gyrA_D87Y 2 3 5 F5 0.294409863 1.294409863 -0.266816335 0.733183665 -0.153578648 0.846421352 CipR-5 gyrA gyrA_D87G 1 4 5 F7 0.011812355 1.011812355 -0.316718032 0.683281968 -0.222820295 0.777179705 CipR-6 marR marR_R94C 1 5 6 F9 0.44087173 1.44087173 0.488284562 1.488284562 0.213713427 1.213713427 CipR-8 marR marR_R77H 3 1 4 G10 0.313854332 1.313854332 0.555085098 1.555085098 0.354585289 1.354585289 CipR-2 marR marR_delta72_82 3 0 3 G12 0.204102068 1.204102068 0.034466963 1.034466963 0.183689914 1.183689914 CipR-3 gyrA gyrA_D87Y 0 2 2 G2 0.195087635 1.195087635 0.286674391 1.286674391 0.323801248 1.323801248 CipR-6 marR marR_R94C 3 1 4 G4 0.166456407 1.166456407 0.381207461 1.381207461 0.303293727 1.303293727 CipR-5 gyrA gyrA_D87G 0 5 5 G6 -0.075947905 0.924052095 -0.078410689 0.921589311 -0.181671369 0.818328631 CipR-8 marR marR_R77H 0 4 4 G8 0.106928176 1.106928176 0.287001696 1.287001696 0.16105835 1.16105835 CipR-1 gyrA gyrA_S83A 1 3 4 H1 0.27884351 1.27884351 0.383004802 1.383004802 0.517448247 1.517448247 CipR-6 marR marR_R94C 1 0 1 H11 0.41504587 1.41504587 0.246657982 1.246657982 0.207102466 1.207102466 CipR-5 gyrA gyrA_D87G 0 2 2 H3 -0.002586047 0.997413953 0.014506827 1.014506827 0.072454606 1.072454606 CipR-8 marR marR_R77H 0 0 0 H5 0.302409102 1.302409102 0.341836335 1.341836335 0.330660252 1.330660252 CipR-1 gyrA gyrA_S83A 1 0 1 H7 0.204432286 1.204432286 0.293691355 1.293691355 0.378925302 1.378925302 CipR-2 marR marR_delta72_82 2 2 4 H9 0.261202556 1.261202556 0.213044998 1.213044998 0.145127233 1.145127233 CipR-3 gyrA gyrA_D87Y 0 3 3