Key to sample site names name in data name in publication CMAND93W Lower Yukon River - West Fork Andreafsky River CMANI92 Lower Kuskokwim River - Aniak River CMFRO92 Alaska Peninsula - Frosty Creek CMKWIN04 Kwiniuk River CMMES92 Bristol Bay - Meshik River CMMUL94 Nushagak River - Mulchatna River CMNIUK04 Niukluk River CMNOA91 Noatak River CMNOME05 Nome River CMSFKU95 Upper Kuskokwim River - South Fork Kuskokwim CMSHE92 Upper Yukon River - Sheenjek River key to SNP assay names name in data name in publication CTS1-627 Oke_PP2A-635 CTS98-270 duplicate of Oke_Tf-278. This locus was exluded from analyses presented in the paper. Oke_AhR1-278 Oke_AhR1-278 Oke_AHR1-78 Oke_AhR1-78 AHR1 phased AhR1 Oke_ARF Oke_arf-319 Oke_BAMBI Oke_BAMBI-116 Oke_CCT3-143 Oke_U401-143 Oke_CCT3-220 Oke_U401-220 CCt3 phased U401 Oke_CKS-389 Oke_CKS-389 Oke_COPA Oke_copa-211 mtDNA(Oke_Cr30,Oke_Cr231,Oke_Cr386,Oke_ND3-69) phased mtDNA Oke_ctgf-105 Oke_ctgf-105 Oke_DM20-548 Oke_DM20-548 Oke_EIF4EB Oke_eif4ebp2-64 Oke_FARSLA-242 Oke_FARSLA-242 Oke_GHII-2943 Oke_GHII-2943 Oke_GHII-3129 Oke_GHII-3129 GHII phased GHII Oke_GnRH-373 Oke_GnRH-373 Oke_GnRH-527 Oke_GnRH-527 GnRH phased GnRH Oke_GPDH Oke_GPDH-191 Oke_GPH-105 Oke_GPH-105 Oke_GPH-78 Oke_GPH-78 GPH phased GPH Oke_HGFA Oke_HGFA-319 Oke_hnRNPL-239 Oke_hnRNPL-239 Oke_HP-182 Oke_HP-182 Oke_HSP90BA-299 Oke_hsc71-199 Oke_IGFI.1 Oke_HSP90BA-299 Oke_IL-1RA Oke_il-1racp-67 Oke_IL8r-272 Oke_IL8r-272 Oke_IL8r-406 Oke_IL8r-406 IL8r phased IL8r Oke_KPNA2-87 Oke_KPNA2-87 Oke_MAPK1-135 Oke_MAPK1-135 Oke_MARCKS-362 Oke_MARCKS-362 Oke_MOESIN Oke_Moesin-160 Oke_ras1-362 Oke_ras1-249 Oke_RFC2 Oke_RFC2-618 Oke_RH1OP Oke_RH1op-245 Oke_SClkF2 Oke_SClkF2R2-239 Oke_serpin Oke_serpin-140 Oke_TCP1-78 Oke_TCP1-78 Oke_Tf-278 Oke_Tf-278 Oke_TSHA1 Oke_Tsha1 196 Oke_u1-519 Oke_u1-519 Oke_U202 Oke_u202-131 Oke_U212 Oke_u212-87 Oke_U216 Oke_u216-222 Oke_U217 Oke_u217-172 Oke_U22 Oke_u200-385 Oke_U302-195 Oke_U302-195 Oke_U502-241 Oke_U502-241 Oke_U503-272 Oke_U503-272 Oke_U503-302 Oke_U503-302 u503 phased U503 Oke_U504-228 Oke_U504-228 Oke_U505-112 Oke_U505-112 Oke_U506-110 Oke_U506-110 Oke_U507-286 Oke_U507-286 Oke_U507-87 Oke_U507-87 u507 phased U507 Oke_ZAN-132 Oke_U305-130 Oke_ZAN-311 Oke_U305-307 Oke_ZAN-334 Oke_U305-330 ZAN phased U305 Oke_zP3b Oke_Zp3b-314 key to nuclear snp allele names allele name in data nucleotide represented 100 A 200 C 300 G 400 T 500 - (deletion) key to mitochondrial haplotype names (phased mtDNA) Oke_Cr30 Oke_Cr231 Oke_Cr386 Oke_ND3-69 compound haplotype allele name in data sheet A T - G AT-G 110 G T G A GTGA 120 A C - G AC-G 130 A T G G ATGG 140 A T - A AT-A 160