File Diet_GNP2016_trnL_filtered_data.xlsx This file contains the filtered sequences produced by g (5'-GGGCAATCCTGAGCCAA-3') and h (5'-CCATTGAGTCTCTGCACCTATC-3') primers (Taberlet et al. 2007). The sequences have been produced by the Illumina technology (HiSeq 2500 platform, 2x150bp paired-end) and were filtered according to the filtering procedure described in the supplementary information of Pansu et al. (2018) 'Trophic ecology of large herbivores in a reassembling African ecosystem' Data collection: Johan Pansu, Arjun Potter, Justine Atkins, Robert Pringle. Johan Pansu, Arjun Potter, Justine Atkins, Robert Pringle collected fecal samples. Johan Pansu and Arjun Potter performed DNA extractions. Johan Pansu and Arjun Potter performed DNA amplifications. Sequencing was performed by the Lewis Singler Institute for Integrative Genomics at Princeton University (Princeton, NJ, USA) Johan Pansu performed data filtering. Contact author: Johan Pansu (johan.pansu@gmail.com) Column heading: sample:PNG16_AEME01: Mean number of reads (values averaged among replicates) of a given sequence observed in the sample PNG16_AEME01. sample:PNG16_AEME02: Mean number of reads (values averaged among replicates) of a given sequence observed in the sample PNG16_AEME02. sample:PNG16_AEME03: Mean number of reads (values averaged among replicates) of a given sequence observed in the sample PNG16_AEME03. ... Sequence_name : name of the sequence Best_identity_GDB : best identity score with the closest sequence in the global reference database (from embl) Taxid_GDB : taxid of the scientific name obtained by assignment with the global reference database (from embl) Best_identity_LDB : best identity score with the closest sequence in the local database (Gorongosa reference database, generated for this study) Taxid_LDB : taxid of the scientific name obtained by assignment with the local database (Gorongosa reference database, generated for this study) best_DB : best database for taxonomic assignment Best_identity : best identity score for the best database Best_taxid : taxid of the scientific name obtained by assignment with the best database Family_name : family name of the identified taxa with the best database Genus_name : genus name of the identified taxa with the best database Species_name : species name of the identified taxa with the best database Scientific_name : scientific name of the identified taxa with the best database Sequence : DNA sequence