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Data from: A quantitative inventory of yeast P body proteins reveals principles of composition and specificity

Citation

Xing, Wenmin; Muhlrad, Denise; Parker, Roy; Rosen, Michael K. (2020), Data from: A quantitative inventory of yeast P body proteins reveals principles of composition and specificity, Dryad, Dataset, https://doi.org/10.5061/dryad.02v6wwq0q

Abstract

P bodies are archetypal biomolecular condensates that concentrate proteins and RNA without a surrounding membrane. While dozens of P body proteins are known, the concentrations of components in the compartment have not been measured. We used live cell imaging to generate a quantitative inventory of the major proteins in yeast P bodies. Only 7 proteins are highly concentrated in P bodies (5.1-15 uM); the 24 others examined are appreciably lower (most ≤ 2.6 uM). P body concentration correlates inversely with cytoplasmic exchange rate. Sequence elements driving Dcp2 concentration into P bodies are distributed across the protein and act cooperatively. Our data indicate that P bodies, and probably other condensates, are biochemically simpler than suggested by proteomic analyses, with implications for specificity, reconstitution and evolution.

Methods

All images were acquired using a Leica SP8 Laser Scanning Confocal Microscope using a 100 X 1.4 NA oil immersion objective. Unprocessed raw images are in the dataset.

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