README: COVID Information Commons Archive

https://doi.org/10.5061/dryad.37pvmcvqp

This archive is a snapshot of the COVID Information Commons (CIC). The CIC is a live database that records information about COVID-19 researchers and their projects.

Description of the data and file structure

The snapshot of the CIC contains the following files, each listed with a description of the fields it contains:

cic_people_export.json -- Researchers who have studied aspects of COVID-19. All information known about the researchers in CIC, except email addresses, which have been filtered out for privacy purposes. Some researchers have minimal information, as CIC may only know their name via a reference in a grant description. Other people have more complete records, if they have provided additional information to the CIC.

• affiliations -- organizational affiliations of the researcher (as described for cic_orgs_export.json)
• first_name -- researcher's first name
• last_name -- researcher's last name
• orcid -- researchers identifier in the ORCID identifier system
• keywords -- subject keywords that are applicable to the researcher's focus
• website -- URLs for sites associated with the researcher's work
• comments -- clarifying comments that the researcher has submitted about their work, including preferred methods of contact

cic_orgs_export.json -- Organization names, along with their location and ROR identifiers when available.

• ror -- identifier of the organization in the Research Organization Registry
• name -- name of the organization
• state -- US State of the organization
• country -- home country of the organization

cic_grants_export.json -- Grant objects that have been harvested from their respective funding agencies and augmented with other information gathered by CIC.

• award_id -- identifier for this grant as given by the funding agency
• title -- title of the grant
• funder -- funding agency (includes the funding agency's name and identifier from the Research Organization Registry)
• funder_divisions -- divisions of the funding agency responsible for the grant
• program_officials -- administrative offical at the funding agency who oversees the grant (as described in cic_people_export.json)
• start_date -- starting date for the grant
• end_date -- ending date for the grant
• award_amount -- total amount of the grant, in US dollars
• principal_investigator -- lead researcher for the grant (as described in cic_people_export.json)
• other_investigators -- researchers who worked on the grant (as described in cic_people_export.json)
• awardee_organization -- organization that received the grant (as described in cic_organizations_export.json)
• abstract -- description of the grant

cic_assets_export.json -- Images and videos associated with the CIC researchers and grants. CIC does not store the media files directly, so they are presented as URLs without persistent identifiers. However, all of the URLs are valid at the time the snapshot is made.

• filename -- name of the asset file. There are two special values that indicate how particular assets are used within the CIC. "cic_video" indicates a video of a presentation the researcher gave to the CIC community. "profile_image" indicates an image that may be used on the researcher's profile.
• download_path -- URL for accessing the asset file
• author -- CIC researcher associated with the asset (as described in cic_people_export.json)

cic_clusters.csv -- Clustering of grant data, produced by analysis in the Lingo4g tool.

• labels -- subject labels assigned to this grant during the clustering process
• parent _exemplar -- award_id of the grant that serves as exemplar for the cluster hierarchically above the current cluster
• exemplar -- award_id of the grant that serves as examplar for the current cluster
• similarity_to_exemplar -- similarity betwen the current grant and the exemplar
• cluster_labels -- summary subject labels for the current cluster
• title -- title of the grant
• award_id -- award_id of the grant
• state -- US State of the organization that received the grant
• principal_investigator -- lead researcher for the grant

Sharing/Access information

In addition to the snapshots of data available here, data may also be downloaded from the COVID Information Commons site, which includes an open API.

Data was derived from the following sources:

• National Science Foundation award search API
• National Institutes of Health RePORTER API

Code/Software

The COVID Information Commons software repository contains both the code for running the CIC system and the code used to generate these data files.