Data from: Sequence-based association analysis reveals an MGST1 eQTL with pleiotropic effects on bovine milk composition

Littlejohn, Mathew D., Livestock Improvement Corporation

Tiplady, Kathryn, Livestock Improvement Corporation

Fink, Tania A., University of Auckland

Lehnert, Klaus, University of Auckland

Lopdell, Thomas, University of Auckland

Johnson, Thomas, Livestock Improvement Corporation

Couldrey, Christine, Livestock Improvement Corporation

Keehan, Michael D., Livestock Improvement Corporation

Sherlock, Richard G., Livestock Improvement Corporation

Harland, Chad, Livestock Improvement Corporation

Scott, Andrew, Livestock Improvement Corporation

Snell, Russell G., University of Auckland

Davis, Stephen R., Livestock Improvement Corporation

Spelman, Richard J., Livestock Improvement Corporation

Publication date: May 6, 2016

Publisher: Dryad

https://doi.org/10.5061/dryad.457br

Citation

Littlejohn, Mathew D. et al. (2016), Data from: Sequence-based association analysis reveals an MGST1 eQTL with pleiotropic effects on bovine milk composition, Dryad, Dataset, https://doi.org/10.5061/dryad.457br

Abstract

[No abstract entered]

Usage Notes

GWAS_pop_data

Chromosome 5 Illumina BovineHD genotypes and phenotypes for the milk fat percentage GWAS population.

RNAseq_pop_imputed_seq_data

Chromsome 5 imputed sequence and gene expression data used for eQTL mapping

RNAseq_pop_imputed_seq_data_with_gap_vars

Chromsome 5 imputed sequence and gene expression data used for eQTL mapping - with reference gap variants

Large_pop_imputed_seq

Chromsome 5 imputed sequence and phenotype data used for milk composition association mapping

RNAseq_pop_del_haplotype

Gene expression (phenotypes), pedigree, and diplotype (haplotype pair) data for analysis of the CNV-proxy haplotype

Zipped library of Supplementary files 1-12

A zipped collection of all manuscript supplementary files in their native format (ie. not *.pdf)

Supplementary_files.zip

Location

New Zealand