Skip to main content
Dryad logo

Three-dimensional biofilm growth supports a mutualism involving matrix and nutrient sharing - related scripts and data

Citation

Arjes, Heidi (2021), Three-dimensional biofilm growth supports a mutualism involving matrix and nutrient sharing - related scripts and data, Dryad, Dataset, https://doi.org/10.5061/dryad.79cnp5htm

Abstract

This dataset contains the supporting scripts and data used to analyze co-culture fluorescent colony images in high-throughput. It contains some example images that can be used in the scripts.

It also contains the script used to plot and determine the maximum growth rates of growth curves of some of the mutants and the script used to stitch overlapping microscope images.

Methods

Methods are included in the following manuscript (link below to biorxiv, in review at eLife): Three-dimensional biofilm growth supports a mutualism involving matrix and nutrient sharing manuscript by Arjes et al.

Usage Notes

Usage notes are included on each script and accompanying ReadMe files when appropriate.