Data from: All is fish that comes to the net: metabarcoding for rapid fisheries catch assessment
Data files
Nov 18, 2020 version files 2.75 GB
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12S_R1.fastq.tar.gz
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12S_R2.fastq.tar.gz
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12S_tag&primers.txt
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catch_data.xlsx
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COI_R1.fastq.tar.gz
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COI_R2.fastq.tar.gz
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COI_tag&primers.txt
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metabarcoding_12S_data.xlsx
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metabarcoding_COI_data.xlsx
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README.pdf
Abstract
Usage notes
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COI_R1.fastq and COI_R2.fastq: COI paired-end FastQ files from the Illumina HiSeq 2x250 bp run.
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COI_tag&primers.txt: COI primers and unique dual-tag combinations (forward and reverse) for 63 COI amplicons (54 slush samples, 2 extraction blanks, 1 PCR negative control, 6 seawater blanks).
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12S_R1.fastq and 12S_R2.fastq: 12S paired-end FastQ files from the Illumina MiSeq 2x150 bp run.
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12S_tag&primers.txt: 12S primers and unique dual-tag combinations (forward and reverse) for 63 12S amplicons (54 slush samples, 2 extraction blanks, 1 PCR negative control, 6 seawater blanks).
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metabarcoding_COI_data.xlsx: number of reads per species/replicate/site after data post-processing and cleaning. Data refer to analyzed taxa: teleosts, elasmobranchs, cephalopods and decapods.
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metabarcoding_12S_data.xlsx: number of reads per species/replicate/site after data post-processing and cleaning. Data refer to analyzed taxa: teleosts and elasmobranchs.