Data from: Dietary tryptophan affects group behavior in a social bird
Data files
Mar 19, 2024 version files 479.76 KB
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aggression_rate.txt
8.78 KB
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group_size.txt
78.15 KB
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N_groups_day.txt
1.30 KB
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N_individuals_day.txt
2.34 KB
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README.md
9.50 KB
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steepness.txt
100 KB
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strength_associations.txt
195.80 KB
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time_groups.txt
75.66 KB
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time_individuals.txt
8.23 KB
Abstract
The amino acid tryptophan (Trp) is precursor of the neurotransmitter serotonin. Trp supplementation or other forms of serotonergic enhancement generally promote pro-social behavior, decreasing aggression and also feeding in different animals. However, past research has been conducted in confined spaces, and there is little work in naturalistic conditions where animals move and associate more freely. We gave a Trp-enriched diet to a free-flying flock of common waxbills (Estrilda astrild) in semi-natural conditions, and monitored group foraging, aggressions during feeding and the social network. Contrary to expectations, aggressiveness and feeding increased during Trp supplementation. Consistent with the prediction of increased social associations, foraging groups became larger and individuals joined more foraging groups, but these changes appear driven by increased appetite during Trp treatment. Also, the mean strength of associations in the social network did not change. Overall, Trp supplementation affected group behavior in this free-flying flock, but mostly in directions unanticipated based on research conducted in small spaces. To harmonize our results with those found in small confined spaces, we hypothesise that free-flying birds have energetic requirements not experienced in lab-housed individuals, which may impact social behaviour and responses to Trp.
Created in March 2024 by Beatriz C. Saldanha (beatriz.saldanha@cibio.up.pt).
GENERAL INFORMATION
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Title:
Data from: Dietary tryptophan affects group behavior in a social bird -
Authors:
Beatriz C. Saldanha 1,2, Patrícia Beltrão 1,2, Ana Cristina R. Gomes 1,2,3, Marta C. Soares 1,2,4, Gonçalo C. Cardoso 1,2 & Sandra Trigo 1,2
1CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, 4485-661 Vairão, Portugal
2BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, 4485-661 Vairão, Portugal
3Department of Zoology, Stockholm University, Svante Arrhenius väg 18B, Stockholm 10691, Sweden
4MARE - Centro de Ciências do Mar e do Ambiente, ARNET -Rede de Investigação Aquática, Departamento de Paisagem, Universidade de Évora, Ambiente e Ordenamento, Rua Romão Ramalho 59,7000-671 Évora, Portugal -
Data collection: 2021
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Funding sources: PTDC/BIA-COM/2644/2020 (doi: 10.54499/PTDC/BIA-COM/2644/2020), DL57/2016/CP1440/CT0019, DL57/2016/CP1440/CT0011, FEDER funds under COMPETE 2020 (CEEC Individual–2021.01458.CEECIND/CP1668/CT0003, doi: 10.54499/2021.01458.CEECIND/CP1668/CT0003),
FCT CEEC IND5ed (doi: 10.54499/2022.03732.ceecind/cp1730/ct0009), FCT CEEC 2022.07867.CEECIND/CP1730/CT0005 (doi.org/10.54499/2022.07867.CEECIND/CP1730/CT0005), SFRH/BD/129002/2017 and SFRH/BD/148392/2019
from FCT with European Union funds. -
Citation for this dataset: Saldanha, Beltrão, Gomes, Soares, Cardoso & Trigo (2024), Data from: Dietary tryptophan affects group behavior in a social bird, Dryad, Dataset
FILE OVERVIEW
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Description of datasets
Datasets for the 10 metrics computed in the research article and used to obtain bootstrap distributions in experimental and control treatments.
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File List:
File ‘aggression_rate.txt’
Description: Aggression rate at the feeders per minute. Data used in Figure 1a.File ‘steepeness.txt’
Description: Steepness of the dominance hierarchy. Data used in Figure 1b.File ‘group_size.txt’
Description: Foraging group size. Data used in Figure 2a.File ‘N_groups_day.txt’
Description: Number of foraging groups per day. Data used in Figure 2b.File ‘time_groups.txt’
Description: Mean time at the feeding area per foraging group (in minutes). Data used in Figure 2c.File ‘N_individuals_day.txt’
Description: Number of foraging groups an individual was present per day. Data used in Figure 2d.File ‘time_individuals.txt’
Description: Mean time an individual spent at the feeders per foraging group (in seconds). Data used in Figure 2e.File ‘strength_associations.txt’
Description: Strength association values between every dyad of individuals. Data used in Figure 3.
METHODOLOGICAL INFORMATION
Data was recorded through a radio-frequency identification (RFID) system (Dorset ID, The Netherlands), present at the feeding area of the mesocosm, which monitored the attendance of common waxbills by reading the passive integrated transponder (PIT) tag, that each and every bird had on a leg ring.
Aggressive displacements were computed with the function available in Beltrão et al. 2021 (doi: 10.1016/j.anbehav.2021.09.011), which also provides the code for this work.
INFORMATION FOR: ‘aggression_rate.txt’
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The file has two variables: (1) Treatment and (2) aggression_rate (per minute per individual).
- The column “Treatment” has 4 categories:
- control_before, tryptophan, and control_after, corresponding to the two control treatments and tryptophan treatment.
- In addition, controls_together is the combined pair of control treatments that preceded and followed tryptophan treatment, in order to compute the bootstrap distribution that will be used for comparison with each treatment.
- The column “aggression_rate” has aggression rates per minute, with each line referring to a different individual in a given treatment.
INFORMATION FOR: ‘steepness.txt’
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The file has three variables: (1) Treatment and (2) Winner (3) Loser. No respective units since it is a count.
- The column “Treatment” has 4 categories:
- control_before, tryptophan, and control_after, corresponding to the two control treatments and tryptophan treatment.
- In addition, controls_together is the combined pair of control treatments that preceded and followed tryptophan treatment, in order to compute the bootstrap distribution that will be used for comparison with each treatment.
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Each line represents a displacement event at a feeder between 2 individuals (i.e., columns “Winner” and “Loser”).
- For these data was used the function “estimate_uncertainty_by_repeatability” (from the aniDom package), procuding parametric bootstrapped replicates, contrarily to the remaining behavioural variables, which are used to compute the non-parametric bootstrap distributions.
INFORMATION FOR: ‘group_size.txt’
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The file has two variables: (1) Treatment and (2) group_size. No respective units since it is a count.
- The column “Treatment” has 4 categories:
- control_before, tryptophan, and control_after, corresponding to the two control treatments and tryptophan treatment.
- In addition, controls_together is the combined pair of control treatments that preceded and followed tryptophan treatment, in order to compute the bootstrap distribution that will be used for comparison with each treatment.
- The column “group_size” has the number of individuals in a foraging group, with each line referring to a different foraging group in a given treatment.
INFORMATION FOR: ‘N_groups_day.txt’
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The file has two variables: (1) Treatment and (2) N_groups_day (per day).
- The column “Treatment” has 4 categories:
- control_before, tryptophan, and control_after, corresponding to the two control treatments and tryptophan treatment.
- In addition, controls_together is the combined pair of control treatments that preceded and followed tryptophan treatment, in order to compute the bootstrap distribution that will be used for comparison with each treatment.
- The column “N_groups_day” has the number of foraging groups per day, with each line referring to a different day in a given treatment.
INFORMATION FOR: ‘time_groups.txt’
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The file has two variables: (1) Treatment and (2) time_groups (in minutes).
- The column “Treatment” has 4 categories:
- control_before, tryptophan, and control_after, corresponding to the two control treatments and tryptophan treatment.
- In addition, controls_together is the combined pair of control treatments that preceded and followed tryptophan treatment, in order to compute the bootstrap distribution that will be used for comparison with each treatment.
- The column “time_groups” has the time (minutes) a foraging group spent at the feeding area, with each line referring to a different foraging group in a given treatment.
INFORMATION FOR: ‘N_individuals_day.txt’
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The file has two variables: (1) Treatment and (2) N_individual_day (per day).
- The column “Treatment” has 4 categories:
- control_before, tryptophan, and control_after, corresponding to the two control treatments and tryptophan treatment.
- In addition, controls_together is the combined pair of control treatments that preceded and followed tryptophan treatment, in order to compute the bootstrap distribution that will be used for comparison with each treatment.
- The column “N_individuals_day” has the mean number of foraging groups in which each individual was present, with each line referring to a different day in a given treatment.
INFORMATION FOR: ‘time_individuals.txt’
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The file has two variables: (1) Treatment and (2) time_individuals (in seconds).
- The column “Treatment” has 4 categories:
- control_before, tryptophan, and control_after, corresponding to the two control treatments and tryptophan treatment.
- In addition, controls_together is the combined pair of control treatments that preceded and followed tryptophan treatment, in order to compute the bootstrap distribution that will be used for comparison with each treatment.
- The column “time_individuals” has the mean time (seconds) an individual spent at the feeders per foraging group, with each line referring to a different individual in a given treatment.
INFORMATION FOR: ‘strength_associations.txt’
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The file has two variables: (1) Treatment and (2) strength_associations. No respective units since it is a rate.
- The variable “Treatment” has 3 categories:
- control_before, tryptophan, and control_after, each categorie corresponding to a control or tryptophan treatment.
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The column “strength_associations” has the strength of association between 2 individuals, with each line referring to a different dyad in a given treatment.
- Using the data for each treatment, we computed 1000 bootstrapped replicates, and for each replicate computed the mean strength of association (Figure 3a), the network entropy (Figure 3b), and the coefficient of variation of the strengths of association (Figure 3c).