Co-assembly of publicly available biocrust sequence datasets
Data files
Sep 24, 2021 version files 547.17 MB
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biocrust_bins.001.fasta
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biocrust_bins.002.fasta
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biocrust_bins.003.fasta
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biocrust_bins.004.fasta
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biocrust_bins.005.fasta
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biocrust_bins.006.fasta
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biocrust_bins.007.fasta
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biocrust_bins.008.fasta
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biocrust_bins.009.fasta
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biocrust_bins.010.fasta
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biocrust_bins.011.fasta
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biocrust_bins.012.fasta
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biocrust_bins.013.fasta
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biocrust_bins.014.fasta
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biocrust_bins.015.fasta
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biocrust_bins.016.fasta
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biocrust_bins.017.fasta
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biocrust_bins.018.fasta
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biocrust_bins.019.fasta
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biocrust_bins.020.fasta
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biocrust_bins.021.fasta
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biocrust_bins.022.fasta
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biocrust_bins.023.fasta
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biocrust_bins.024.fasta
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biocrust_bins.025.fasta
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biocrust_bins.026.fasta
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biocrust_bins.027.fasta
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biocrust_bins.028.fasta
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biocrust_bins.029.fasta
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biocrust_bins.030.fasta
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biocrust_bins.031.fasta
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biocrust_bins.032.fasta
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biocrust_bins.033.fasta
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biocrust_bins.034.fasta
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biocrust_bins.035.fasta
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biocrust_bins.036.fasta
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biocrust_bins.037.fasta
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biocrust_bins.038.fasta
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biocrust_bins.039.fasta
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biocrust_bins.040.fasta
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biocrust_bins.041.fasta
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biocrust_bins.042.fasta
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biocrust_bins.043.fasta
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biocrust_bins.044.fasta
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biocrust_bins.045.fasta
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biocrust_bins.046.fasta
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biocrust_bins.047.fasta
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biocrust_bins.048.fasta
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biocrust_bins.049.fasta
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biocrust_bins.050.fasta
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biocrust_bins.051.fasta
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biocrust_bins.052.fasta
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biocrust_bins.053.fasta
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biocrust_bins.054.fasta
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biocrust_bins.055.fasta
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biocrust_bins.056.fasta
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biocrust_bins.057.fasta
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biocrust_bins.058.fasta
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biocrust_bins.059.fasta
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biocrust_bins.060.fasta
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biocrust_bins.061.fasta
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biocrust_bins.062.fasta
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biocrust_bins.063.fasta
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biocrust_bins.064.fasta
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biocrust_bins.065.fasta
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biocrust_bins.066.fasta
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biocrust_bins.067.fasta
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biocrust_bins.068.fasta
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biocrust_bins.069.fasta
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biocrust_bins.070.fasta
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biocrust_bins.071.fasta
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biocrust_bins.072.fasta
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biocrust_bins.073.fasta
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biocrust_bins.074.fasta
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biocrust_bins.075.fasta
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biocrust_bins.076.fasta
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biocrust_bins.077.fasta
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biocrust_bins.078.fasta
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biocrust_bins.079.fasta
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biocrust_bins.080.fasta
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biocrust_bins.081.fasta
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biocrust_bins.082.fasta
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biocrust_bins.083.fasta
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biocrust_bins.084.fasta
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biocrust_bins.085.fasta
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biocrust_bins.086.fasta
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biocrust_bins.087.fasta
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biocrust_bins.088.fasta
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biocrust_bins.089.fasta
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biocrust_bins.090.fasta
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biocrust_bins.091.fasta
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biocrust_bins.092.fasta
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biocrust_bins.093.fasta
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biocrust_bins.094.fasta
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biocrust_bins.095.fasta
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biocrust_bins.096.fasta
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biocrust_bins.097.fasta
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biocrust_bins.098.fasta
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biocrust_bins.099.fasta
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biocrust_bins.100.fasta
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biocrust_bins.101.fasta
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biocrust_bins.102.fasta
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biocrust_bins.103.fasta
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biocrust_bins.104.fasta
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biocrust_bins.105.fasta
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biocrust_bins.106.fasta
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MAG_quality.csv
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MAG_taxonomy.csv
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Steven_Biocrust_readme.txt
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Abstract
The growing body of metagenomic data offers the possibility for creating longer consensus assemblies for ecosystems of interest as a community resource. We tested this concept by performing a co-assembly of metagenome and metatranscriptome data from five independent studies of biological soil crust communities in the southwestern United States.
These are metagenomic assemblies made up from publicly available datasets collected over the course of 2021. See the associated publication for a list of the datasets that went into the final assembly.
Raw sequence reads were assembled with MetaHipMer and the resulting contigs were binned with MaxBin. Quality of the resulting bins were determined with CheckM