Data from: Spatiotemporal patterns in profiles of amino acids indicates they are unlikely singular olfactory cues underlying natal homing in migratory fishes
Data files
Jan 27, 2025 version files 41.21 KB
Abstract
Migratory fishes are renowned for their ability to home to natal streams for spawning. Learned olfactory cues play a critical role in natal homing of Pacific salmon and other fishes, but the underlying chemical signature of streams remains poorly understood after decades of study. The molecules that convey a stream-specific odor must differ among sites but remain constant over time. Among leading odorant candidates are amino acids; however, little research has assessed the spatial and temporal variability of amino acid profiles in streams.
Here, we report a comprehensive chemical study of dissolved amino acids as potential olfactory cues for homing by migratory fish. Specifically, we profiled amino acids in water from twenty-three streams in the upper Laurentian Great Lakes basin over two years. Using this dataset, we investigated variation in amino acid profiles 1) among regions and rivers within a year, 2) between years, and 3) among sites and across the seasons of migratory and early development within a stream.
Liquid-chromatography tandem mass spectrometry revealed nanomolar concentrations for most of the 20 L-amino acids measured, above the levels detectable by migratory fishes studied. Moreover, amino acid profiles were temporally stable between two years and across an annual season from adult spawning migration through offspring early-life development within a stream. However, spatial differences in amino acid profiles were evident primarily over large geographic distances (among regions) but not among tributaries within regions or among sites within a stream.
Collectively, our results indicate dissolved amino acids may be consistent components of rivers’ odorant profiles but suggest additional molecules are likely important for natal homing of migratory fishes to specific spawning sites. We suggest that future studies consider the combined importance of amino acids and molecules from other chemical classes. Understanding the chemical basis of olfactory-guided natal homing is especially important as human activities could alter the odorant profiles of streams and thereby disrupt fish migrations.
README: Data from: Spatial and temporal variability in river chemistry indicates amino acids profiles are unlikely singular olfactory cues underlying natal homing in migratory fishes
Description of the data and file structure
This CSV file is organized with rows representing individual water samples and columns representing specific measures recorded for each water sample. A value of 'NA' is used when measures are below the limit of detection. Below we list expanded titles for each variable:
- River: Name of river where water sample was collected
- Region: Region where sample was collected. This label is used to differentiate groups of rivers for statistical analyses.
- State: State within the United States where sample was collected (i.e., LP_MI: Lower peninsula of Michigan; UP_MI: Upper peninsula of Michigan, WI: Wisconsin)
- Sample: Sample period identification. This value represent the sampling time within a given year
- Rep: Replicate number to distinguish replicate samples from the same sample period and sample location
- Year: Year when sample was collected
- Lon: longitude of sampling site
- Lat: latitude of sampling site
- Valine: concentration of the amino acid valine in each water sample (nM)
- Leucine: concentration of the amino acid leucine in each water sample (nM)
- Isoleucine: concentration of the amino acid isoleucine in each water sample (nM)
- Alanine: concentration of the amino acid alanine in each water sample (nM)
- Tryptophan: concentration of the amino acid tryptophan in each water sample (nM)
- Methionine: concentration of the amino acid methionine in each water sample (nM)
- Serine: concentration of the amino acid serine in each water sample (nM)
- Phenylalanine: concentration of the amino acid phenylalanine in each water sample (nM)
- Lysine: concentration of the amino acid lysine in each water sample (nM)
- Histidine: concentration of the amino acid histidine in each water sample (nM)
- Proline: concentration of the amino acid proline in each water sample (nM)
- Threonine: concentration of the amino acid threonine in each water sample (nM)
- Glycine: concentration of the amino acid glycine in each water sample (nM)
- Glutamine: concentration of the amino acid glutamine in each water sample (nM)
- Glutamic.Acid: concentration of the amino acid glutamic acid in each water sample (nM)
- Tyrosine: concentration of the amino acid tyrosine in each water sample (nM)
- Asparagine: concentration of the amino acid asparagine in each water sample (nM)
- Aspartic.Acid: concentration of the amino acid aspartic acid in each water sample (nM)
- Arginine: concentration of the amino acid arginine in each water sample (nM)
- Cysteine: concentration of the amino acid cysteine in each water sample (nM)