Intermittent bulk release of human cytomegalovirus: associated data
Data files
Jun 22, 2022 version files 149.06 GB
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10.30.17_CCD_Acquire_1.tif
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11.25.32_CCD_Acquire_1.tif
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14.02.04_CCD_Acquire_1.tif
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14.06.10_CCD_Acquire_1.tif
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14.07.00_CCD_Acquire_1.tif
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14.08.30_CCD_Acquire_1.tif
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14.43.28_CCD_Acquire_1.tif
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15.17.08_CCD_Acquire_1.tif
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15.18.00_CCD_Acquire_1.tif
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15.19.30_CCD_Acquire_1.tif
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15.19.47_CCD_Acquire_1.tif
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15.21.44_CCD_Acquire_1.tif
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15.34.39_CCD_Acquire_1.tif
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15.43.55_CCD_Acquire_1.tif
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16.29.15_CCD_Acquire_1.tif
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16.30.48_CCD_Acquire_1.tif
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17.21.46_CCD_Acquire_1.tif
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17.25.03_CCD_Acquire_1.tif
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18.27.20_CCD_Acquire_1.tif
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18.29.50_CCD_Acquire_1.tif
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18.53.51_CCD_Acquire_1.tif
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18.56.03_CCD_Acquire_1.tif
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18.58.16_CCD_Acquire_1.tif
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19.02.31_CCD_Acquire_1.tif
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19.02.39_CCD_Acquire_1.tif
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19.03.13_CCD_Acquire_1.tif
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2.nd2
3.44 GB
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3.nd2
2.05 GB
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Bosse_2021-12-06_12h55m29s.scn
12.11 MB
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Bosse_2021-12-06_12h55m29s(StarBright_B700).raw16.tif
12.11 MB
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Bosse_2021-12-06_12h56m32s.scn
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Bosse_2021-12-06_12h56m32s(StarBright_B700).raw16.tif
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Bosse_2021-12-06_16h21m01s.scn
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Bosse_2021-12-06_16h21m01s(StarBright_B700).raw16.tif
12.11 MB
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Bosse_2021-12-10_11h13m57s(Rhodamine).raw16.tif
12.11 MB
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CCD_Search_0040_1.tif
8.39 MB
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Cell_Viability_Assay_Tipifarnib.csv
453 B
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Cell1_EVA_Vol1.tif
15.12 MB
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Cell1_EVA_Vol2.tif
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Cell1_EVA_Vol3.tif
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Cell1_EVA_Vol4.tif
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Cell1_MViB_Vol1.tif
15.12 MB
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Cell1_MViB_Vol2.tif
15.12 MB
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Cell2_EVA_Vol1.tif
31.15 MB
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Cell2_EVA_Vol2.tif
31.15 MB
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Cell2_EVA_Vol3.tif
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Cell2_EVA_Vol4.tif
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Cell2_MViB_Vol1.tif
31.15 MB
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Cell3_EVA_Vol1.tif
30.48 MB
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Cell3_EVA_Vol2.tif
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Cell3_EVA_Vol3.tif
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Cell3_MViB_Vol1.tif
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Cell3_MViB_Vol2.tif
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Cell3_MViB_Vol3.tif
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Cell4_EVA_Vol1.tif
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Cell4_EVA_Vol2.tif
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Cell4_EVA_Vol3.tif
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Cell4_EVA_Vol4.tif
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Cell4_MViB_Vol1.tif
29.67 MB
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Cell4_MViB_Vol2.tif
31.15 MB
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Cell4_MViB_Vol3.tif
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DMSO_1_.nd2
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DMSO_1_001.nd2
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DMSO_1_002.nd2
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DMSO_1_003.nd2
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DMSO_2_.nd2
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DMSO_2_001.nd2
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DMSO_2_002.nd2
444.44 MB
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DMSO_3_.nd2
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DMSO_3_001.nd2
444.43 MB
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E-HFF-CD63pHluorin-HCMVSNAPScarlet_72hpi-TIRF_001.tif
3.78 GB
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E-HFF-CD63pHluorin-HCMVSNAPScarlet_72hpi-TIRF_002.tif
3.78 GB
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E-HFF-CD63pHluorin-HCMVSNAPScarlet_72hpi-TIRF_007.tif
3.47 GB
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EVA-Quantifications_Merlin.csv
194 B
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Events-HFF-CD63pHluorin-HCMVSNAPScarlet_96hpi-TIRF_006.tif
2.16 GB
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HFF-CD63pHluorin-HCMVSNAPScarlet_72hpi-TIRF_017.tif
3.78 GB
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HFF-HCMV-DC-45min-02-Deskew-crop.tif
14.42 GB
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HFF-HCMV-DC-96hpiCLEM002.nd2
170.63 MB
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HFF-HCMV-Merlin-DC-5dpi_Rep1-1_.nd2
609.81 MB
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HFF-HCMV-Merlin-DC-5dpi_Rep1-1_001.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep1-1_002.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep1-2_.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep1-2_001.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep1-2_002.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep1-2_003.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep1-2_004.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep1-3_.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep1-3_001.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep1-3_002.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep1-3_003.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-1_.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-1_001.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-1_002.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-1_003.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-2_.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-2_001.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-2_002.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-2_003.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-3_.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-3_001.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-3_002.nd2
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HFF-HCMV-Merlin-DC-5dpi_Rep3-3_003.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-1_.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-1_001.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-1_002.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-1_003.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-2_.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-2_001.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-2_002.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-2_003.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-3_.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-3_001.nd2
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HFF-HCMV-Merlin-DC-5dpi-Rep2-3_002.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep1-1_.nd2
406.59 MB
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HFF-HCMV-Merlin-WT-5dpi_Rep1-1_001.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep1-1_002.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep1-2_.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep1-2_001.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep1-2_002.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep1-3_.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep1-3_001.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep1-3_002.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep1-3_003.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-1_.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-1_001.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-1_002.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-2_.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-2_001.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-2_002.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-2_003.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-3_.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-3_001.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-3_002.nd2
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HFF-HCMV-Merlin-WT-5dpi_Rep3-3_003.nd2
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HFF-HCMV-Merlin-WT-5dpi-Rep2-1_.nd2
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HFF-HCMV-Merlin-WT-5dpi-Rep2-1_001.nd2
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HFF-HCMV-Merlin-WT-5dpi-Rep2-2_.nd2
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HFF-HCMV-Merlin-WT-5dpi-Rep2-2_001.nd2
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HFF-HCMV-Merlin-WT-5dpi-Rep2-2_002.nd2
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HFF-HCMV-Merlin-WT-5dpi-Rep2-2_003.nd2
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HFF-HCMV-Merlin-WT-5dpi-Rep2-3_.nd2
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HFF-HCMV-Merlin-WT-5dpi-Rep2-3_001.nd2
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HFF-HCMV-Merlin-WT-5dpi-Rep2-3_002.nd2
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HFF-HCMV-Merlin-WT-5dpi-Rep2-3_003.nd2
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HFF-HCMV-SnapScarlet_Rep3-1_.nd2
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HFF-HCMV-SnapScarlet_Rep3-1_001.nd2
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HFF-HCMV-SnapScarlet_Rep3-1_002.nd2
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HFF-HCMV-SnapScarlet_Rep3-1_003.nd2
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HFF-HCMV-SnapScarlet_Rep3-2_.nd2
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HFF-HCMV-SnapScarlet_Rep3-2_001.nd2
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HFF-HCMV-SnapScarlet_Rep3-2_002.nd2
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HFF-HCMV-SnapScarlet_Rep3-3_.nd2
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HFF-HCMV-SnapScarlet_Rep3-3_001.nd2
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HFF-HCMV-SnapScarlet_Rep3-3_002.nd2
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HFF-HCMV-SnapScarlet_Rep3-4_.nd2
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HFF-HCMV-WT_antigB_Rep1-1_.nd2
609.71 MB
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HFF-HCMV-WT_antigB_Rep1-1_001.nd2
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HFF-HCMV-WT_antigB_Rep1-1_002.nd2
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HFF-HCMV-WT_antigB_Rep1-1_003.nd2
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HFF-HCMV-WT_antigB_Rep1-2_.nd2
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HFF-HCMV-WT_antigB_Rep1-2_001.nd2
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HFF-HCMV-WT_antigB_Rep1-2_002.nd2
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HFF-HCMV-WT_antigB_Rep1-3_.nd2
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HFF-HCMV-WT_antigB_Rep1-3_001.nd2
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HFF-HCMV-WT_antigB_Rep1-3_002.nd2
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HFF-HCMV-WT_antigB_Rep1-4_.nd2
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HFF-HCMV-WT_antigB_Rep2-1_.nd2
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HFF-HCMV-WT_antigB_Rep2-1_002.nd2
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HFF-HCMV-WT_antigB_Rep2-2_.nd2
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HFF-HCMV-WT_antigB_Rep2-2_001.nd2
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HFF-HCMV-WT_antigB_Rep2-2_002.nd2
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HFF-HCMV-WT_antigB_Rep2-3_.nd2
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HFF-HCMV-WT_antigB_Rep2-3_001.nd2
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HFF-HCMV-WT_antigB_Rep2-3_002.nd2
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HFF-HCMV-WT_antigB_Rep2-4_.nd2
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HFF-HCMV-WT_antigB_Rep2-4_001.nd2
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HFF-HCMV-WT_antigB_Rep2-4_002.nd2
609.72 MB
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HFF-HCMVSnapScarlet_Rep1-1_.nd2
406.58 MB
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HFF-HCMVSnapScarlet_Rep1-1_ADJ_.nd2
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HFF-HCMVSnapScarlet_Rep1-1_ADJ_001.nd2
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HFF-HCMVSnapScarlet_Rep1-2_.nd2
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HFF-HCMVSnapScarlet_Rep1-2_ADJ_.nd2
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HFF-HCMVSnapScarlet_Rep1-2_ADJ_001.nd2
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HFF-HCMVSnapScarlet_Rep1-3_.nd2
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HFF-HCMVSnapScarlet_Rep1-3_ADJ_.nd2
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HFF-HCMVSnapScarlet_Rep1-3_ADJ_001.nd2
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HFF-HCMVSnapScarlet_Rep1-4_.nd2
406.58 MB
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HFF-HCMVSnapScarlet_Rep1-4_ADJ_.nd2
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HFF-HCMVSnapScarlet_Rep1-4_ADJ_001.nd2
406.58 MB
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HFF-HCMVSnapScarlet_Rep2-1_.nd2
406.59 MB
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HFF-HCMVSnapScarlet_Rep2-1_001.nd2
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HFF-HCMVSnapScarlet_Rep2-1_002.nd2
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HFF-HCMVSnapScarlet_Rep2-2_.nd2
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HFF-HCMVSnapScarlet_Rep2-2_001.nd2
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HFF-HCMVSnapScarlet_Rep2-3_.nd2
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HFF-HCMVSnapScarlet_Rep2-3_001.nd2
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HFF-HCMVSnapScarlet_Rep2-4_.nd2
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HFF-HCMVSnapScarlet_Rep2-4_001.nd2
406.58 MB
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HFF-HCMVSnapScarlet_Rep2-4_002.nd2
406.59 MB
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HFF-WT-HCMVSnapScarlet-AntiCD81-96hpi_001.nd2
176.58 MB
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HFF-WT-HCMVSnapScarlet-AntiCD9-96hpi_002.nd2
176.58 MB
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HFFCD63pHluori-HCMVSnapScarlet-96hpi-16-Create_Image_Subset-01.czi
25.82 GB
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HFFCD63pHluorin-HCMVSnapScarlet-AntigB647_96hpi_.nd2
176.57 MB
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HFFWT-HCMVSnapScarlet-antiCD63_96hpi_005.nd2
176.57 MB
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Inhibitor_Titration_Results.csv
439 B
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Normalized_Intensities.csv
99.11 KB
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Quantification-Content-MViB-EVA.csv
1.12 KB
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Raw_Int_Cytoplasm.csv
1.53 KB
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Raw_Int_EVA.csv
2.47 KB
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Raw_Intensities.csv
65.72 KB
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Raw-Int-gB-vs-CD63.csv
4.58 KB
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README.txt
32.10 KB
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RS1_HFF-HCMV-Merlin-DC_96hpi_.nd2
321.64 MB
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RS1_HFF-HCMV-Merlin-DC_96hpi_001.nd2
321.64 MB
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RS1_HFF-HCMV-Merlin-DC_96hpi_003.nd2
384.60 MB
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TB40-EVA-Quantification.csv
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Tipi_0.1x_1_.nd2
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Tipi_0.1x_1_001.nd2
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Tipi_1x_1_.nd2
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Tipi_1x_2_.nd2
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Tipi_1x_2_001.nd2
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Tipi_1x_3_.nd2
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Tipi_1x_3_001.nd2
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Tipi_2x_1_.nd2
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Tipi_2x_1_001.nd2
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Tipi_2x_1_002.nd2
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Tipi_2x_1_003.nd2
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Tipi_2x_2_.nd2
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Tipi_2x_2_001.nd2
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Tipi_2x_2_002.nd2
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Tipi_2x_3_.nd2
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Tipi_2x_3_001.nd2
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Tipifarnib_EVA_Quantification.csv
187 B
Abstract
Human Cytomegalovirus (HCMV) can infect a variety of cell types by using virions of varying glycoprotein compositions. It is still unclear how this diversity is generated, but spatio-temporally separated envelopment and egress pathways might play a role. So far, one egress pathway has been described in which HCMV particles are individually enveloped into small vesicles and are subsequently exocytosed continuously. However, some studies have also found enveloped virus particles inside multivesicular structures but could not link them to productive egress or degradation pathways.
We used a novel 3D-CLEM workflow allowing us to investigate these structures in HCMV morphogenesis and egress at high spatio-temporal resolution. We found that multiple envelopment events occurred at individual vesicles leading to multiviral bodies (MViBs), which subsequently traversed the cytoplasm to release virions as intermittent bulk pulses at the plasma membrane to form extracellular virus accumulations (EVAs). Our data support the existence of a novel bona fide HCMV egress pathway, which opens the gate to evaluate divergent egress pathways in generating virion diversity.
Methods
Details on data acquisition and processing can be found in the original publication.
Usage notes
Some microscopy raw data are in the proprietary format of the microscope manufacturer. However, all files can be opened with an up-to-date version of Fiji/ImageJ, using the BioFormats importer.