An Abundant Mutualist Can Protect Corals From Multiple Stressors
Data files
Jan 13, 2025 version files 2.15 MB
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10550956.csv
155.18 KB
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10550958.csv
155.67 KB
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10550960.csv
155.50 KB
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10550962.csv
155.36 KB
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10550963.csv
155.32 KB
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10550964.csv
155.29 KB
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10550969.csv
155.55 KB
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10551953.csv
154.64 KB
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10551954.csv
182.02 KB
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10551956.csv
155.77 KB
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10551958.csv
153.92 KB
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10551961.csv
155.76 KB
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10568876.csv
182.41 KB
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algae_weight.csv
639 B
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algal_feeding_trial.csv
716 B
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algal_monitoring.csv
3.30 KB
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benthic_survey.csv
1.85 KB
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colony_specs.csv
819 B
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coral_tissue_loss.csv
45.42 KB
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crab_feeding_behavior.csv
528 B
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crab_feeding_imageJ.csv
843 B
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field_crab_surveys.csv
1.23 KB
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HOBO_metadata.csv
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initial_buoyant_weights.csv
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metadata.csv
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README.md
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Abstract
Mutualisms can increase the ability of foundation species to resist individual stressors, but it remains unclear whether mutualisms can also ameliorate co-occurring stressors for habitat-forming species. To examine whether a suspected mutualist could improve foundation species’ resistance to multiple stressors, we tested how a common coral-dwelling crab affected corals exposed to macroalgal contact and physical wounding during a widespread heat stress event using flow-through tanks supplied with seawater from a nearby reef flat. High temperatures on the reef flat, which raised the temperature in our tanks, appeared to trigger rapid tissue loss in experimental corals, but the amount of tissue lost by corals was strongly determined by treatment. Macroalgal contact increased, while the presence of a crab decreased, the amount of tissue lost. Although the effect of wounding was not strong in isolation, when wounding occurred in the presence of a crab, coral survival unexpectedly increased above that of all other treatments. We propose that wounding increased coral resistance to stress through elevated attraction to injured corals—a result that appeared supported in a field experiment. These results highlight that mutualisms can interact with stressors in unexpected ways, buffering the effects of both local and global stressors on foundation species.
README: An abundant mutualist can protect corals from multiple stressors
https://doi.org/10.5061/dryad.hdr7sqvtd
Description of the data and file structure
These data were collected as part of a study on the Great Barrier Reef examining the effects of a coral-associated crab on coral health from 2020-2023.
Files and variables
Name: Julianna Renzi
Institution: University of California, Santa Barbara
Email: jrenzi@ucsb.edu
Dataset Overview
This dataset contains the data required to replicate analyses in Renzi et al. (2025), examining the effects of a common coral-dwelling crab on coral health.
Permitting
All research was conducted on Heron Island, a small (0.29 km^2) coral cay in the Capricorn Bunker sector of the southern Great Barrier Reef (23°25.800'S 151°59.940'E) under Great Barrier Reef Marine Park Authority permit G19/43415.1. We collected all organisms and conducted all surveys in the scientific research zone of the reef flat on the southern portion of the island adjacent to the Heron Island Research Station.
Recommended Citation
Julianna J. Renzi, Joseph P. Morton, Jessica L. Bergman, Devin Rowell, Edwin S. Iversen Jr., Leo C. Gaskins, Juliana Hoehne-Diana, and Brian R. Silliman. 2025. An abundant mutualist can protect corals from multiple stressors. Proceedings of the Royal Society B.
Acknowledgments
This work would not be possible without the help of many, but particularly: the StatLab at the University of California, Santa Barbara; Tracy Ainsworth; Selina Ward, Stephanie Valdez; Walter Torres; and the entire staff at the Heron Island Research Station. Thank you. JJR was funded by a National Science Foundation Graduate Research Fellowship (DGE-1644868), Duke University, and a Rhodes Data Expedition grant. LCG was supported by a National Science Foundation Graduate Research Fellowship (DGE-1644868). BRS was supported by Duke RESTORE and Foundation for the Carolinas.
Citations
Davies, S. (1989). Short-term growth measurements of corals using an accurate buoyant weighing technique. Marine Biology, 101(3), 389–395. https://doi.org/10.1007/BF00428135
Schneider, C.A., Rasband, W.S., Eliceiri, K.W. (2012). NIH Image to ImageJ: 25 years of image analysis. Nature methods, 9(7):671-5.
Files
Field surveys
File: benthic_survey.csv
Field surveys
Description: Results from benthic surveys of the scientific zone of the Heron Island reef flat where organisms were collected and the field experiment was conducted. To document the abundance of macroalgae on the flat, we surveyed the benthos of the scientific zone along six transects with 15, 1 m^2 photo quadrats per transect, each spaced 3 m apart. Percent cover of macroalgae, live coral, and dead coral was visually estimated from photos.
Variables
- Date: Date of the survey in M/DD/YY format
- Transect: Transect number; transects ran perpendicular to shore and there are 6 transects total
- Quadrat: Quadrat number along a given transect; there are 15 quadrats/transect
- Perc_macroalgae: Estimated percent cover of macroalgae; 10 = 10%
- Perc_coral: Estimated percent cover of live stony corals; 10 = 10%
- Perc_dead_coral: Estimated percent cover of dead corals/reef structure; 10 = 10%
File: field_crab_surveys.csv
Field surveys
Description: To assess how common crabs were on Acropora aspera colonies, we surveyed crab communities on A. aspera at low tide, counting the abundance of crabs and noting what part of the colony they were on (living, dead, or the boundary between living and dead).
Variables
- Coral_ID: colony identifier for survey purposes; these ID's do not match any other ID's in the datasets provided here
- Substrate_type: classification of which part of the A. aspera colony the Cyclodius crab was on (i.e., living tissue, dead, or the boundary between living and dead). No_cyclodius means that there were no crabs observed for a colony.
- Cyclodius: the abundance of Cyclodius crabs in each category on a given colony
Mesocosm experiment
File: initial_buoyant_weights.csv
Mesocosm experiment
Description: Starting weights of A. aspera fragments, which we used to make sure that there were not significant differences in size among treatments. Corals were weighed using buoyant weighing techniques (Davies 1989) on January 31, 2020 prior to treatment application.
Variables
- Coral_ID: Coral identifier for experimental corals; matches coral identifiers for other CSVs related to the tank-based experiment
- Initial_dry_weight: initial coral weight in grams
File: coral_tissue_loss.csv
Mesocosm experiment
Description: Daily estimates of tissue loss on experimental corals. The front and back of fragments were photographed daily and estimates made from photographs. The two sides were averaged together to get approximate tissue loss for a given day.
Variables
- Coral_ID: Coral identifier for experimental corals; matches coral identifiers for other CSVs related to the tank-based experiment
- Date: Date corals were observed
- Side: Which side (front or back) estimate relates to--sides were averaged to get percent tissue loss for a given fragment on a given day
- Percent_dead: Estimate of tissue loss; 10 = 10%
File: metadata.csv
Mesocosm experiment
Description: Metadata for the mesocom experiment
Variables
- Coral_ID: Coral identifier that matches other mesocosm datasets
- Treatment: Experimental treatment identifier; NNW = no crab, no algae, wounding; NAW = no crab, algae, wounding; CNN = crab, no algae, no wounding; CAN = crab, algae, no wounding; NAN = no crab, no algae, no wounding; NNN = no crab, no algae, no wounding (full control); CAW = crab, algae, wounding; CNW = crab, no algae, wounding
- Crab_treatment: Binary (Y = yes, N = no) as to whether a crab was added
- Algae_treatment: Binary (Y = yes, N = no) as to whether a macroalgal clump was added
- Wounding_treatment: Binary (Y = yes, N = no) as to whether a coral was wounded
- Tank_ID: Tank identifier; there were 20 total tanks with 4 units per tank
- Crab_size_mm_initial: Carapace length, in mm, of the crab added; NA written if the coral was not in a crab treatment
- HOBO_ID: HOBO temperature logger identifier, if one was attached to the unit; NA was written if there was not a temperature logger attached
- Initial_algal_biomass_g: Initial algal biomass, in grams, added to corals in macroalgal treatments; NA was written if the coral was not in a macroalgal treatment
File: HOBO_metadata.csv
Temperature: mesocosm experiment
Description: Metadata for temperature logger CSVs
Variables
- Hobo_ID: HOBO identifier
- Tank: Tank identifier that the logger was recording from
- Date_pulled: Day the logger was pulled from the mesocosm experiment
File: 10550964.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10550964
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10550964: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10551958.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10551958
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10551958: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10550963.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10550963
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10550963: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10550969.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10550969
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10550969: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10568876.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10568876
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10568876: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10550956.csv
Description: Temperature logger file for HOBO logger 10550956
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10550956: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10551961.csv
Description: Temperature logger file for HOBO logger 10551961
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10551961: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10550962.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10550962
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10550962: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10551954.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10551954
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10551954: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10550960.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10550960
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10550960: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10551953.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10551953
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10551953: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10550958.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10550958
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10550958: Information below is the un-modified logger information, including temperature, date, and light intensity
File: 10551956.csv
Temperature: mesocosm experiment
Description: Temperature logger file for HOBO logger 10551956
Variables
- Plot Title: HOBO logger ID--see logger metadata for information on tank placement
- 10551956: Information below is the un-modified logger information, including temperature, date, and light intensity
Field experiment
File: colony_specs.csv
Field experiment
Description: Colony location and size for A. aspera colonies used for the field wounding-algal experiment
Variables
- Colony_ID: Experimental colony identifier; matches with other experimental datasets, but not survey or mesocosm datasets
- length_cm: Maximum length, in centimeters, of the coral colony
- width_cm: Width, in centimeters, of the coral colony
- height_cm: Height, in centimeters, of the coral colony
- lat: Latitude of the coral colony's location
- long: Longitude of the coral colony's location
File: algae_weight.csv
Field experiment
Description: Weight of macroalgae used in the field experiment
Variables
- Colony_ID: Experimental colony identifier; matches with other experimental datasets, but not survey or mesocosm datasets
- NW_algae_initial_weight: Initial weight in grams of the macroalgae added to the control/not wounded part of the colony
- W_algae_intial_weight: Initial weight in grams of the macroalgae added to the wounded part of the colony
- NW_final_weight: Final weight in grams of the macroalgae added to the control/not wounded part of the colony
- W_final_weight: Final weight in grams of the macroalgae added to the wounded part of the colony
File: algal_monitoring.csv
Field experiment
Description: Monitoring data from visual surveys of algal clumps each day of the field experiment.
Variables
- Colony_ID: Experimental colony identifier; matches with other experimental datasets, but not survey or mesocosm datasets
- algae_remaining_yn: Binary value (1 = yes, 0 = no) detailing whether there was any macroalgae left on the patch at a given time point
- time_point: Day of the field experiment on which the observation was made; on the seventh day, algal clumps were carefully removed from the patch and reweighed
- treatment: Experimental treatment; NW = no wound/control, W = wounded
- notes: Notes
Behavioral trials
File: crab_feeding_behavior.csv
Behavioral trials
Description: Results from video analysis of crab trials detailing the number of bites crabs took on different parts of an A. aspera coral. Videos were reviewed to determine the number of bites each crab took on live tissue, dead skeleton, and along the tissue loss margin in each trial. We defined a bite as any time a crab used a claw to scrape along the coral and then brought the claw to its mouth. Given that the margin between living and dead coral is a thin line, we defined C. ungulatus as feeding along the margin if its claw scraped across both live tissue and dead skeleton before bringing its claw to its mouth.
Variables
- Trial: Trial identifier
- Carapace_mm: Carapace length, in mm, of crab used in the trial
- Bites_alive: Number of bites taken on live coral tissue
- Bites_margin: Number of bites taken on the margin of live and dead
- Bites_dead: Number of bites taken on the recently dead zone of tissue loss
File: crab_feeding_imageJ.csv'
Behavioral trials
Description: Point contact data used for approximating the percent cover of live tissue, the zone of recent tissue loss, and the margin between living and dead on each coral fragment used in feeding video trials. The grid was created using a uniform grid in ImageJ (Schneider et al. 2012)
Variables
- Trial: Feeding video trial identifier
- Date: Date the trial was conducted
- Pixels^2: Pixel grid size set within ImageJ
- Alive_Pixels: Number of grid cross sections that fell on top of alive coral tissue
- Margin_Pixels: Number of grid cross sections that fell on top of the margin between alive and dead
- Dead_Pixels: Number of grid cross sections that fell on top of the zone of tissue loss
File: algal_feeding_trial.csv
Behavioral trials
Description: To test whether C. ungulatus reduces macroalgal biomass in tanks, we placed crabs in containers with macroalgae and monitored biomass removal over three days. Each algal clump was spun for 60 seconds and weighed before and after the trial to calculate biomass loss and percent biomass loss. Given that there were holes in each container to allow for water flow, we also ran 8 control trials to approximate background algal loss rate.
Variables
- Species: Whether there was a Cyclodius crab ("Cyclodius") in the container or not ("Control")
- Carapace_mm: Carapace width of the crab used in a trial if Cyclodius was added; NA indicates control
- Jar_number: Container identifier
- Initial_weight_g: Initial weight of the macroalgae in grams per trial
- Final_weight_g: Final weight of the macroalgae in grams per trial
Code/software
Data can all be viewed using Microsoft Excel or a similar software. All data were analyzed in R statistical software; accompanying code for analysis is also available on GitHub (https://github.com/juliannajollyrenzi/Renzi_et_al_2025_PRSB) or through Zenodo.
Access information
- These data can also be found within the GitHub repo used to analyze them
Methods
See associated manuscript for method information.