Developmental life history is associated with variation in rates of climatic niche evolution in a salamander adaptive radiation
Shepard, Donald; Weaver, Samuel; Kozak, Kenneth (2020), Developmental life history is associated with variation in rates of climatic niche evolution in a salamander adaptive radiation, Dryad, Dataset, https://doi.org/10.5061/dryad.m0cfxpp0k
The following files are included:
Desmog_24taxa11loci_concatenated.nex contains the aligned, concatenated DNA sequences for all 11 loci for single exemplars of each species. Partitions are included in a mrbayes block below the DNA sequences.
Desmog_24taxa11loci_chronogram.nex is the BEAST chronogram from the concatenated analysis.
Desmog_62taxa11loci_alignments.zip contains the phased DNA sequence alignment (nexus format) of each of the 11 loci used in the species tree analysis. Also included is starBEAST_speciestraits.txt which assigns each of the 62 individuals to one of 24 species.
Desmog_62taxa11loci_speciestree.nex is the species tree from the *BEAST species tree analysis of 11 loci for 62 individuals of 24 species.
Desmog_coords_bioclim_data.xlsx contains tab 1: latitude and longitude for localities of each species and the bioclim variables for those localities, tab 2: snout-vent length (SVL in mm), larval period, and microhabitat of each species.
Supplemental_Tables.docx contains tables S1: information on DNA loci and primers, S2: nucleotide substitution models used for each locus in analyses, and S3: specimen/sample information.
National Science Foundation, Award: DEB-0949590