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Synchronous activity patterns in the dentate gyrus during immobility

Cite this dataset

Pofahl, Martin et al. (2021). Synchronous activity patterns in the dentate gyrus during immobility [Dataset]. Dryad.


The hippocampal dentate gyrus is an important relay conveying sensory information from the entorhinal cortex to the hippocampus proper. During exploration, the dentate gyrus has been proposed to act as a pattern separator. However, the dentate gyrus also shows structured activity during immobility and sleep. The properties of these activity patterns at cellular resolution, and their role in hippocampal-dependent memory processes have remained unclear. Using dual-color in-vivo two-photon Ca2+ imaging, we show that in immobile mice dentate granule cells generate sparse, synchronized activity patterns associated with entorhinal cortex activation. These population events are structured and modified by changes in the environment; and they incorporate place- and speed cells. Importantly, they are more similar than expected by chance to population patterns evoked during self-motion. Using optogenetic inhibition, we show that granule cell activity is not only required during exploration, but also during immobility in order to form dentate gyrus-dependent spatial memories.


Neuronal data from dentate gyrus granule cells.

Data was recorded using two-photon imaging in awake mice. 

Individual cells and their flourescence traces were identified using non-negativ matrix factorization (Pnevmatikakis et al., 2016)




Deutsche Forschungsgemeinschaft, Award: SFB 1089