Riverscape properties contribute to the origin and structure of a hybrid zone in a Neotropical freshwater fish
Britto Barreto, Silvia; Knowles, L. Lacey; Affonso, Paulo Roberto; Batalha-Filho, Henrique (2020), Riverscape properties contribute to the origin and structure of a hybrid zone in a Neotropical freshwater fish, Dryad, Dataset, https://doi.org/10.5061/dryad.mpg4f4qwx
(1) faststructure and gghybrid: input files for fastSTRUCTURE (.str) and gghybrid (.csv) analyses. The gghybrid file contains two columns to the left of the marker columns, which correspond to the individual references and the sample population (see Figure 1 in Barreto et al. 2020).
(2) parallelnewhybrid: contains a file in the NewHybrids format and its associated individuals file. Two other copies of the genotype file were used to run parallelnewhybrid.
(3) hzar morphological data: input files for HZAR cline analyses using the caudal peduncle and eye coloration marks.
(4) hzar genomic data: input files for HZAR cline analyses using the mtDNA haplotypes, the ancestry coefficients estimated in fastSTRUCTURE (K = 2), and the 99 putatively unlinked SNPs (i.e., one SNP per locus) from which we estimated cline parameter values independently.