Data from: Melanism in polymorphic terrestrial snakes: A meta-analysis and systematic review
Data files
Sep 20, 2024 version files 36.89 KB
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data_and_script.zip
35.38 KB
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README.md
1.50 KB
Abstract
Background and aim
Color polymorphic populations constitute excellent model systems for testing ecological and evolutionary hypotheses, as alternate colorations are associated with differences in various biological, behavioral, and life-history traits. Melanism is the most common and most obvious form of polymorphism. In reptiles in general (and snakes in particular), thermal melanism has been a popular hypothesis used to explain the appearance of black individuals. It suggests that a trade-off exists between superior thermoregulation and reduced protection through the loss of crypsis. Surprisingly, despite the growing body of literature available, to date there are only two qualitative reviews on the evolutionary significance of melanism in reptiles and no quantitative synthesis. We conducted the first systematic review and meta-analysis summarizing the current knowledge on melanism in polymorphic terrestrial snakes and synthesized the evidence for an adaptive advantage of the melanistic morph.
Location
Northern Hemisphere
Taxon
Polymorphic terrestrial snakes
Results
Mean prevalence of melanism is 31% with no significant differences between species. Annual precipitation was a significant moderator of melanism prevalence. Our results revealed no significant differences in odds ratios of melanism between sexes or in mean body size.
Main conclusions
Environmental plasticity can be considered the primary cause for melanism, possibly as a result of seasonal climatic variations, a result corroborated by the formal meta-analysis conducted. Conclusions from the meta-analysis are that melanism in snakes follows Gloger’s rule, as is the case in birds and mammals, and as opposed to the thermal melanism hypothesis. Further, our findings do not lend support for other predictions from the thermal melanism hypothesis, such as skewed frequency of melanistics in favor of males or females, or larger body sizes in black individuals. Our results hold implications for the future diversity of animal populations, as climate change is predicted to decrease the degree of color variation. --
README: Melanism in polymorphic terrestrial snakes: A meta-analysis and systematic review
https://doi.org/10.5061/dryad.n5tb2rc55
Description of the data and file structure
The zip archive contains the data and R script used for the meta-analyses and meta-regressions regarding polymorphic terrestrial snakes.
The Excel file contains three sheets, the first represing data for frequency of melanistics and non-melanistcs, the second sheet contains data on frequency of melanistic individuals for each sex, while the last sheet contains body size data for menalistics and standard-colored individuals.
The sheet used for the meta-analysis of mean body (lnRR_size) contains some NA cells for standard deviations. During the analysis these were replaced with standard deviatons generated using ImputeSD. For detailed explanations please read the article.
Measurement units for body sizes were not recorded during the data extraction phase.
The Word document (Appendix S1) contains the references used for extracting data for the meta-analyses, a detailed systematic review of the literature, as well as various tables and plots that were not presented in the main article.
Files and variables
File: data_and_script.zip
Description: data and R script used for the meta-analyses and meta-regressions
Code/software
R software with the appropriate packages loaded for running the R script
Microsoft Excel for opening the database file.
Methods
We conducted an extensive literature search up to 30th of June 2023 and records were screened using the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines (Page et al., 2021). We used Google Scholar and Web of Science databases, with no limit on the year of the publication. In Google Scholar we used the general search terms “melanism snake”, “melanistic snake”, "snake" AND "melanism" OR "melanistic" OR "melanic" and "snake" AND "melanism" OR "melanistic" OR "melanic", which amounted to 16295 results (Figure 1). In Web of Science, we used the search terms “melanism snake” and “melanistic snake”, giving us a further 116 results. We removed 31 records as duplicates while the rest were screened directly in the search window, therefore saving only the relevant articles. In the end our database contained 150 papers, from which we further excluded 41 which did not contain usable data (i.e. data used for the analyses was not part of the study), 26 in which data was not retrievable or not in a usable format and 1 record was inaccessible, leaving 77 papers to be used for the meta-analyses (Figure 1).
In our database we only included published studies, written in English, therefore excluding Ph.D. or M.Sc. theses and any type of report, without initial regard to sample size or the total number of studies for each species. We included only data pertaining to adult terrestrial snakes, as immature stages frequently possess standard coloration and melanism develops in adults (e.g.: Edgren (1957), Nilson and Andrén (1981), authors’ personal observations on Nikolsky’s viper, Vipera berus nikolskii) .