Data from: Phylogeny and biogeography of the Amazonian Pachyptera (Bignonieae, Bignoniaceae)
Cite this dataset
Francisco, Jessica; Lohmann, Lúcia (2020). Data from: Phylogeny and biogeography of the Amazonian Pachyptera (Bignonieae, Bignoniaceae) [Dataset]. Dryad. https://doi.org/10.5061/dryad.p8cz8w9kq
Abstract
Usage notes
This file is related to the article “Phylogeny and Biogeography of the Amazonian Pachyptera (Bignonieae, Bignoniaceae)”, to be published to Systematic Botany, and derived from a part of my master dissertation.
Supplementary Materials
Tables
Table S1. Information on the phylogenetic, phylogeographic, and time calibration analyses, partitions, models, and parameters.
Table S2. Divergence time estimates and ancestral area reconstructions for Pachyptera conducted with S-DIVA, DEC, and BSSVS. Areas with (/) suggest similar posterior probabilities.
Figures
Fig. S1. Consensus tree of Pachyptera inferred from the Bayesian analysis of the ndhF (A) and rpl32–trnL (B) datasets. Posterior probability and bootstrap values are shown above branches. The outgroups are shown in grey.
Fig. S2. Consensus tree of Pachyptera inferred from the Bayesian analysis of the combined cpDNA dataset (i.e., ndhF and rpl32–trnL). Posterior probability and bootstrap values are shown above branches. The outgroups are shown in grey.
Fig. S3. Consensus tree of Pachyptera inferred from the Bayesian analysis of the PepC dataset. Posterior probability and bootstrap values are shown above branches. The outgroups are shown in grey.
Fig. S4. Statistical parsimony network of Pachyptera kerere constructed based on the analysis of the ndhF and rpl32–trnL datasets. Circle sizes are proportional to the frequency of each haplotype. Small empty circles represent mutational steps.