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Data from: The genomic basis for short-term evolution of environmental adaptation in maize

Citation

Wisser, Randall (2019), Data from: The genomic basis for short-term evolution of environmental adaptation in maize, Dryad, Dataset, https://doi.org/10.5061/dryad.q573n5tdt

Abstract

Quality control genotype data (45,718 variant sites) for samples from Hallauer's Tusón. Tab delimited file. A header row is included. The first column ("label") lists sample names, the second column ("popdata") lists the generation to which each sample belongs, and the remaining columns correspond to the genotype data. Unphased diploid genotype calls are recorded in the following format: 1/1. Variant encoding: 1=A, 2=C, 3=G, 4=T, 5=deletion, 6=insertion (5 and 6 are used for the ZmCCT10_CACTA locus). Missing genotype calls are encoded as NA.

Data preview: 

label    popdata    PZE.101000060    PZE.101000088
C0_062314_002    0    2/1    NA
C0_062314_003    0    2/2    3/3