Data from: Assessing current genetic status of the Hainan gibbon using historical and demographic baselines: implications for conservation management of species of extreme rarity
Bryant, Jessica V., Zoological Society of London
Gottelli, Dada, Zoological Society of London
Zeng, Xinyuan, Bawangling National Nature Reserve Management Office; Changjiang Lizu Autonomous County Hainan 572722 China
Hong, Xiaojiang, Bawangling National Nature Reserve Management Office; Changjiang Lizu Autonomous County Hainan 572722 China
Chan, Bosco P.L., Kadoorie Conservation China; Kadoorie Farm and Botanic Garden; Lam Kam Road Tai Po New Territories Hong Kong
Fellowes, John R., University of Hong Kong
Zhang, Ya-Ping, Yunnan University
Luo, Jing, Yunnan University
Durrant, Christopher, Zoological Society of London
Geissmann, Thomas, University of Zurich
Chatterjee, Helen J., University College London
Turvey, Samuel T., Zoological Society of London
Published Jun 07, 2016 on Dryad.
Cite this dataset
Bryant, Jessica V. et al. (2016). Data from: Assessing current genetic status of the Hainan gibbon using historical and demographic baselines: implications for conservation management of species of extreme rarity [Dataset]. Dryad. https://doi.org/10.5061/dryad.r1mc3
Evidence-based conservation planning is crucial for informing management decisions for species of extreme rarity, but collection of robust data on genetic status or other parameters can be extremely challenging for such species. The Hainan gibbon, possibly the world's rarest mammal, consists of a single population of ~25 individuals restricted to one protected area on Hainan Island, China, and has persisted for over 30 years at exceptionally low population size. Analysis of genotypes at 11 microsatellite loci from faecal samples for 36% of the current global population and tissue samples from 62% of existing historical museum specimens demonstrates limited current genetic diversity (Na = 2.27, Ar = 2.24, He = 0.43); diversity has declined since the 19th century and even further within the last 30 years, representing declines of ~30% from historical levels (Na = 3.36, Ar = 3.29, He = 0.63). Significant differentiation is seen between current and historical samples (FST = 0.156, P = 0.0315), and the current population exhibits extremely small Ne (current Ne = 2.16). There is evidence for both a recent population bottleneck and an earlier bottleneck, with population size already reasonably low by the late 19th century (historical Ne = 1162.96). Individuals in the current population are related at the level of half- to full-siblings between social groups, and full-siblings or parent–offspring within a social group, suggesting that inbreeding is likely to increase in the future. The species' current reduced genetic diversity must be considered during conservation planning, particularly for expectations of likely population recovery, indicating that intensive, carefully planned management is essential.
Hainan gibbon microsatellite genotypes
Hainan gibbon genotypes for 13 polymorphic microsatellite loci with associated sample information (sample years, locations, number of samples/individual, number of DNA extractions/individual, final consensus genoptypes), plus microsatellite multiplex mixes used for genotyping.