Using global remote camera data of a “solitary” species complex to evaluate the drivers of group formation
Data files
Feb 16, 2024 version files 7.24 MB
Abstract
The social system of animals involves a complex interplay between physiology, natural history, and the environment. Long relied upon discrete categorizations of “social” and “solitary” inhibit our capacity to understand species, and their interactions with the world around them. Here, we use a globally distributed camera trapping dataset to test the drivers of aggregating into groups in a species complex (martens and relatives, family Mustelidae, Order Carnivora) assumed to be obligately solitary. We use a simple quantification, the probability of being detected in a group, that was applied across our globally derived camera trap dataset. Using a series of binomial generalized mixed-effects models applied to a dataset of 16,483 independent detections across 17 countries on four continents we test explicit hypotheses about potential drivers of group formation. We observe a wide range of probabilities of being detected in groups within the “solitary” model system, with the probability of aggregating in groups varying by more than an order of magnitude. We demonstrate that a species’ proclivity towards aggregating in groups is underpinned by a range of resource-related factors, primarily the distribution of resources, with increasing patchiness of resources facilitating group formation, as well as interactions between environmental conditions (resource constancy/winter severity) and physiology (energy storage capabilities). Combined these factors explain observed variance in context-dependent tendencies towards grouping. The wide variation in propensities to aggregate with conspecifics observed here highlights how continued failure to recognise complexities in the social behaviours of apparently “solitary” species limits our understanding not only of the individual species, but also the causes and consequences of group formation.
README: Using global remote camera data of a “solitary” species complex to evaluate the drivers of group formation
Joshua P. Twining, Chris Sutherland, Andrzej Zalewski, Michael V. Cove, Johnny Birks, Oliver R. Wearn, Jessica Haysom, Anna Wereszczuk, Emiliano Manzo, Paola Bartolommei, Alessio Mortelliti, Bryn Evans, Brian D. Gerber, Thomas J. McGreevy Jr., Laken S. Ganoe, Juliana Masseloux, Amy E. Mayer, Izabela Wierzbowska, Jan Loch, Jocelyn Akins, Donovan Drummey, William McShea, Stephanie Manke, Lain Pardo, Andy Boyce, Sheng Li, Roslina Binti Ragai, Ronglarp Sukmasuang, Álvaro José Villafañe Trujillo, Carlos Lopez-Gonzlez, Nalleli Elvira Lara-Daz, Olivia Cosby, Cristian N. Waggershauser, Jack Bamber, Frances Stewart, Jason Fisher, Angela Fuller, Kelly Perkins, Roger A. Powell.
Author Information
A. Principal investigator contact information
Name: Joshua P. Twining
Institution: Cornell University
Address: DNRE, Cornell University, Fernow Hall, Ithaca, NY, USA, 14850
Email: jpt93@cornell.edu
Date of collection: 2020 - 2023
Geographic location of data collection: Global
Funding sources that supported the collection of the data: None
Recommended citation for this dataset: Twining et al. (2022). Data and code from: Using global remote camera data of a “solitary” species complex to evaluate the drivers of group formation
Data and file overview
Methodological information: All camera trapping data was gathered using a snow-ball literature review method.
1. Martes.social.binom.no.dens.latllongprep.fulldata.withmovebankcovs_new.csv
This file contains all the detection event information and related covariate information each in this analysis. Each row is a independent detection, each column is a variable, and each cell is a value.
- Number of variables: 22
- Number of rows: 33994
- Missing data code: N/A
- Abbreviations used: NA
- Other: None
Table 1. Detailing the columns contained within the data .csv and the description and sources of each value.
Column name | Description |
---|---|
Record.ID | Unique identifier for each detection |
Species | The species of marten and relative that was detected |
DateTime | The date and time in DD/MM/YYYY HH:MM format |
Day | The ordinal day of the year |
Year | The calender year |
Time | The time (24 hour format) |
Method | Two level factor: Baited camera = camera trap was baited with either food or scent lure vs. Unbaited camera = no bait or lure was used |
Region | The region the camera trap was located in |
Site | A site name as provided by data contributors |
Lat | The latitude of the camera trap (WGS 84) |
Long | The longitude of the camera trap (WGS 84) |
Habitat | A local habitat description as provided by data contributor |
Climate | A two level factor: Tropical (dry season and wet season) vs. Temperate (spring, summer, autumn, winter) |
Number.of.Individuals | The number of individual animals contained within the image |
Author | The data contributor of the detection |
Group | Binary coding of whether there there was 1 animal in an image (0) or >1 animal in an image (1) |
Mass | The average mass of the species |
Resource | The resource patchiness metric, full description of which and relevant references can be found in associated publication |
Temp_diff | The annual temperature difference at that site calculated from MODIS Land Surface Temperature estimates (Wan, Hook, and Hulley, 2021) |
GPP | The gross primary productivity of a site calculated from MODIS Land Satellite estimates (Running, Mu, and Zhao, 2021) |
random | A random number generated from a uniform distribution between 0-1 to test for colinearity between covariates. |
Methods
We conducted a literature review of camera trap research in regions across the globe within the expected ranges of any member of the Martes complex during 2000 – 2020. We used search terms related to specific species names as well as generic terms such as “marten”, “camera trap”, “survey”, and “study”. We used these to create a database of correspondence authors from whom we requested data. In addition, we contacted experts, and reviewed the activities of major international non‑governmental organizations. We conducted snowball sampling, obtaining additional datasets from colleagues recommended by previous contacts. Data gathered included longitude and latitude of camera stations, date, time, species names, number of individuals in each image, and other associated information (e.g. use of bait). Whilst camera deployment methods varied across the collated studies (see Appendix S1 for full details of each locality), the general method involved deploying camera traps either without bait or facing a bait station (bait varied with the focal species and included peanuts, eggs, beaver meat, scent lures, and so forth). Cameras were set to take photos in bursts of 1-10 images or videos of 10 seconds – 1 minute with short interval times (1 – 20s). Camera makes and models can also be found listed in Appendix S1.
Usage notes
Anything that opens .csv files e.g. R