Data from: Sampling methodology influences habitat suitability modeling for Chiropteran species
Abstract
Technological advances increase opportunities for novel wildlife survey methods. With increased detection methods, many organizations and agencies are creating habitat suitability models (HSMs) to identify critical habitats and prioritize conservation measures. However, multiple occurrence data types are utilized independently to create these HSMs with little understanding of how biases inherent to those data might impact HSM efficacy.
We sought to understand how different data types can influence HSMs using three bat species (L. borealis, L. cinereus, and P. subflavus). We compared the overlap of models created from passive-only (acoustics), active-only (mist-netting and wind turbine mortalities), and combined occurrences to identify the effect of multiple data types and detection bias.
For each species, the active-only models had the highest discriminatory ability to tell occurrence from background points and for two of the three species, active-only models performed best at maximizing the discrimination between presence and absence values. By comparing the niche overlaps of HSMs between data types, we found a high amount of variation with no species having over 45% overlap between the models. Passive models showed more suitable habitat in agricultural lands, while active models showed higher suitability in forested land, reflecting sampling bias.
Overall, our results emphasize the need to carefully consider the influences of detection and survey biases on modeling, especially when combining multiple data types or using single data types to inform management interventions. Biases from sampling, behavior at the time of detection, false positive rates, and species life history intertwine to create striking differences among models. The final model output should consider biases of each detection type, particularly when the goal is to inform management decisions, as one data type may support very different management strategies than another.
Reference Information
Provenance for this README
- File name: README.txt
- Authors: Sarah M. Gaulke
- Other contributors: Tara C. Hohoff, Brittany A. Rogness, Mark A. Davis
- Date created: 2023-04-01
- Date modified: 2023-04-01
Dataset Version and Release History
Current Version:
- Number: 1.0.0
- Date: 2023-04-01
- Persistent identifier: DOI: 10.5061/dryad.t1g1jwt6r
- Summary of changes: n/a
Embargo Provenance: n/a
- Scope of embargo: n/a
- Embargo period: n/a
Dataset Attribution and Usage
Dataset Title: Data for the article "Sampling Methodology Influences Habitat Suitability Modeling for Chiropteran Species"
Dataset Contributors:
- Creators: Sarah M. Gaulke, Tara C. Hohoff, Brittany A. Rogness, Mark A. Davis
Date of Issue: 2023-01-16
Publisher: Ecology and Evolution
License: Use of these data is covered by the following license:
- Title: CC0 1.0 Universal (CC0 1.0)
- Specification: https://creativecommons.org/publicdomain/zero/1.0/; the authors respectfully request to be contacted by researchers interested in the re-use of these data so that the possibility of collaboration can be discussed.
Suggested Citations:
- Dataset citation: > Gaulke, Sarah M. et al. (2023), Data for: Sampling Methodology Influences Habitat Suitability Modeling for Chiropteran Species, Dryad, Dataset, https://doi.org/10.5061/dryad.t1g1jwt6r.
- Corresponding publication: > Gaulke, S. M., Hohoff, T. C., Rogness, B. A., & Davis, M. A. (2023). Sampling Methodology Influences Habitat Suitability Modeling for Chiropteran Species. Ecology and Evolution. Submitted.
Contact Information
- Name: Sarah M. Gaulke
- Affiliations: Illinois Natural History Survey, Prairie Research Institute, University of Illinois Urbana-Champaign
- ORCID ID: https://orcid.org/0000-0002-2657-5844
Email: sgaulke95@gmail.com
- Alternative Contact: PI
Name: Mark A. Davis
Affiliations: Illinois Natural History Survey, Prairie Research Institute, University of Illinois Urbana-Champaign
ORCID ID: https://orcid.org/0000-0001-9034-9430
Email: davis63@illinois.edu
Address: 1816 S Oak Street, Champaign, IL, 61820
- Contributor ORCID IDs:
Sarah M. Gaulke: https://orcid.org/0000-0002-2657-5844
Tara C. Hohoff: https://orcid.org/0000-0001-5463-711X
Mark A. Davis: https://orcid.org/0000-0001-9034-9430
Additional Dataset Metadata
Acknowledgements
- Funding sources: U.S. Fish and Wildlife Service, Award: W194R1, W194R2, Illinois Department of Natural Resources, Award: IDNR FWS W194 R2
Dates and Locations
Dates of data collection: Occurrence records collated from 1999-2021.
Geographic locations of data collection: Illinois, United States of America.
Methodological Information
- Methods of data collection/generation: see manuscript for details
Data and File Overview
Summary Metrics
- File count: 54
- Total file size: 211 MB
- File formats: .tif (Raster files)
Naming Conventions
- File naming scheme: files with "combined" in the name are the final summed rasters that have been thresholded to create binary layers from both active and passive data types, files with "active" in the name are the final summed rasters that have been thresholded to create binary layers from active data, and files with "passive" in the name are the final summed rasters that have been thresholded to create binary layers from passive data.
- Species naming scheme: LABO- Eastern red bat- Lasiurus borealis; LACI- Hoary bat- Lasiurus cinereus; PESU- Tricolored bat- Perimyotis subflavus
Table of Contents
- PESU_combined.tif
- PESU_active.tif
- PESU_passive.tif
- LABO_combined.tif
- LABO_active.tif
- LABO_passive.tif
- LACI_combined.tif
- LACI_active.tif
- LACI_passive.tif
Setup
Unpacking instructions: n/a
Recommended software/tools: ArcGIS 10.8, QGIS 3.28, R version 4.2.2 (Example R packages to load in tif files include 'raster', 'sf', and 'terra')
Coordinate System: NAD_1983_UTM_Zone_16N
File/Folder Details
Details for: PESU_combined.tif
Description: a raster file of the habitat suitability model from the tri-colored bat that has been thresholded to create a binary map with data from both active and passive data types
Format(s): .tif
Size(s): 5.04MB
Dimensions: 3415 columns and 6190 rows
Values: values are either 0 or 1 with 0 indicating un-suitable habitat and 1 indicating suitable habitat
Details for: PESU_active.tif
Description: a raster file of the habitat suitability model from the tri-colored bat that has been thresholded to create a binary map with data from active data
Format(s): .tif
Size(s): 5.04MB
Dimensions: 3415 columns and 6190 rows
Values: values are either 0 or 1 with 0 indicating un-suitable habitat and 1 indicating suitable habitat
Details for: PESU_passive.tif
Description: a raster file of the habitat suitability model from the tri-colored bat that has been thresholded to create a binary map with data from passive data
Format(s): .tif
Size(s): 5.04MB
Dimensions: 3415 columns and 6190 rows
Values: values are either 0 or 1 with 0 indicating un-suitable habitat and 1 indicating suitable habitat
Details for: LABO_combined.tif
Description: a raster file of the habitat suitability model from the eastern red bat that has been thresholded to create a binary map with data from both active and passive data types
Format(s): .tif
Size(s): 20.16MB
Dimensions: 3415 columns and 6190 rows
Values: values are either 0 or 1 with 0 indicating un-suitable habitat and 1 indicating suitable habitat
Details for: LABO_active.tif
Description: a raster file of the habitat suitability model from the eastern red bat that has been thresholded to create a binary map with data from active data
Format(s): .tif
Size(s): 20.16MB
Dimensions: 3415 columns and 6190 rows
Values: values are either 0 or 1 with 0 indicating un-suitable habitat and 1 indicating suitable habitat
Details for: LABO_passive.tif
Description: a raster file of the habitat suitability model from the eastern red bat that has been thresholded to create a binary map with data from passive data
Format(s): .tif
Size(s): 20.16MB
Dimensions: 3415 columns and 6190 rows
Values: values are either 0 or 1 with 0 indicating un-suitable habitat and 1 indicating suitable habitat
Details for: LACI_combined.tif
Description: a raster file of the habitat suitability model from the hoary bat that has been thresholded to create a binary map with data from both active and passive data types
Format(s): .tif
Size(s): 20.16MB
Dimensions: 3415 columns and 6190 rows
Values: values are either 0 or 1 with 0 indicating un-suitable habitat and 1 indicating suitable habitat
Details for: LACI_active.tif
Description: a raster file of the habitat suitability model from the hoary bat that has been thresholded to create a binary map with data from active data
Format(s): .tif
Size(s): 20.16MB
Dimensions: 3415 columns and 6190 rows
Values: values are either 0 or 1 with 0 indicating un-suitable habitat and 1 indicating suitable habitat
Details for: LACI_passive.tif
Description: a raster file of the habitat suitability model from the hoary bat that has been thresholded to create a binary map with data from passive data
Format(s): .tif
Size(s): 20.16MB
Dimensions: 3415 columns and 6190 rows
Values: values are either 0 or 1 with 0 indicating un-suitable habitat and 1 indicating suitable habitat
END OF README