Convergent adaptation of true crabs (Decapoda: Brachyura) to a gradient of terrestrial environments
Cite this dataset
Wolfe, Joanna M. et al. (2023). Convergent adaptation of true crabs (Decapoda: Brachyura) to a gradient of terrestrial environments [Dataset]. Dryad. https://doi.org/10.5061/dryad.tmpg4f52z
Abstract
Methods
Please see preprint.
Usage notes
Fasta (.fasta) is a file type for sequence data and multiple sequence alignments.
Nexus (.nex) is a common file type for phylogenetic data and multiple sequence alignments, and the required runfile to use MrBayes for phylogenetic analysis.
Newick (.tre, .trees, .treefile) files are phylogenetic tree and chronogram outputs from multiple programs, which can be visualized directly e.g. with Figtree.
XML (.xml) files are used to set up the run parameters for divergence time analysis in BEAST2.
Log (.log) files in this instance are output from the independent chains run by BEAST2, and can be visualized by Tracer.
Funding
National Science Foundation, Award: DEB-1856679
National Science Foundation, Award: DEB-1856667
National Science Foundation, Award: DEB-EF-0531603
National Science Foundation, Award: DEB-EF-0531616
National Science Foundation, Award: DEB-EF-0531762