Experimental data for manuscript "Metrics for Assessing Cytoskeletal Orientational Correlations and Consistency"
Data files
Mar 09, 2015 version files 8.22 GB
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2013_11_04_Ideal_Masked_Images_N4.zip
103.69 MB
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2013_11_04_Regular_Images_N17_part1.zip
1.53 GB
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2013_11_04_Regular_Images_N17_part2.zip
1.53 GB
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2013_12_03_Ideal_Masked_Images_N4.zip
1.05 GB
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2013_12_03_Regular_Images_N17_part1.zip
875.74 MB
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2013_12_03_Regular_Images_N17_part2.zip
1.41 GB
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2014_01_06_Regular_Images_N17.zip
1.62 GB
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COOP_values_n17.xlsx
14.99 KB
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director_values_raw_ideal_using_matlab_code_rotated_angles.xlsx
20.84 KB
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Experimental_Data_Fig4.zip
24.13 MB
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Experimental_Data.xlsx
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IdealCases_N4_S1.xlsx
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IdealCases_non_rotated_angles_Ideal_Masked_Images_N4.zip
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raw_data_case_summary_non_rotated_angles_Regular_Images_N17.zip
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readme.txt
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Triangles_N5.zip
70.48 MB
Abstract
Experimental data used to validate the co-orientational order parameter (COOP). The data is composed of microscopy images of triangular shaped neonatal rat ventricular myocytes and engineered cardiac tissues.
Neonatal rat ventricular myocytes (NRVMs) prepared from two-day old Sprague-Dawley rats. NRVMs were engineered into isotropic tissues and triangular shaped single cells. These samples were fixed and stained with DAPI, phalloidin, and alpha-actinin. Microscopy images were taken of each stain, and MATLAB was used to determine construct orientation. For detailed methods please refer to the publication (Drew et al., PLosCB, 2015)