//Parameters for the coalescence simulation program : fastsimcoal.exe 4 samples to simulate : //Population effective sizes (number of genes) NPOP0 NPOP1 NPOP2 NPOP3 //Samples sizes and samples age 6 20 18 6 //Growth rates : negative growth implies population expansion 0 0 0 0 //Number of migration matrices : 0 implies no migration between demes 0 //historical event: time, source, sink, migrants, new deme size, new growth rate, migration matrix index 3 historical event TDIV1 2 0 1 RESIZE_1 0 0 TDIV2 1 0 1 RESIZE_2 0 0 TDIV3 3 0 1 RESIZE_3 0 0 //Number of independent loci [chromosome] 1 0 //Per chromosome: Number of contiguous linkage Block: a block is a set of contiguous loci 1 //per Block:data type, number of loci, per generation recombination and mutation rates and optional parameters FREQ 1 0 2.5e-8 OUTEXP